Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Morn2-202ENSMUST00000227729 656 ntBASIC10.53□□□□□ -0.72
Trim13Q9CYB0 AC124408.1-201ENSMUST00000228938 707 ntBASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Gm10312-201ENSMUST00000078515 489 ntBASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.53□□□□□ -0.72
Trim13Q9CYB0 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trim13Q9CYB0 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trim13Q9CYB0 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trim13Q9CYB0 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trim13Q9CYB0 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trim13Q9CYB0 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trim13Q9CYB0 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trim13Q9CYB0 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Trim13Q9CYB0 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trim13Q9CYB0 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Gm43966-201ENSMUST00000203301 612 ntBASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 AC159246.1-201ENSMUST00000214478 249 ntBASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Gm8712-201ENSMUST00000221090 701 ntBASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Gm18065-201ENSMUST00000221395 526 ntBASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.52□□□□□ -0.73
Trim13Q9CYB0 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.51□□□□□ -0.73
Trim13Q9CYB0 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.51□□□□□ -0.73
Trim13Q9CYB0 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim13Q9CYB0 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim13Q9CYB0 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim13Q9CYB0 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trim13Q9CYB0 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trim13Q9CYB0 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.51□□□□□ -0.73
Trim13Q9CYB0 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.51□□□□□ -0.73
Trim13Q9CYB0 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim13Q9CYB0 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim13Q9CYB0 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trim13Q9CYB0 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim13Q9CYB0 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim13Q9CYB0 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC10.51□□□□□ -0.73
Trim13Q9CYB0 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.51□□□□□ -0.73
Trim13Q9CYB0 AC154849.3-201ENSMUST00000223733 1660 ntBASIC10.51□□□□□ -0.73
Trim13Q9CYB0 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim13Q9CYB0 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Trim13Q9CYB0 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trim13Q9CYB0 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms