Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Gm23949-201ENSMUST00000104027 127 ntBASIC10.38□□□□□ -0.75
Lims1Q99JW4 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.38□□□□□ -0.75
Lims1Q99JW4 Gm15617-201ENSMUST00000118973 771 ntBASIC10.38□□□□□ -0.75
Lims1Q99JW4 Gm8566-201ENSMUST00000120174 465 ntBASIC10.38□□□□□ -0.75
Lims1Q99JW4 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.38□□□□□ -0.75
Lims1Q99JW4 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.38□□□□□ -0.75
Lims1Q99JW4 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Gm8815-201ENSMUST00000173809 620 ntBASIC10.38□□□□□ -0.75
Lims1Q99JW4 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Gm37597-201ENSMUST00000191853 382 ntBASIC10.38□□□□□ -0.75
Lims1Q99JW4 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.38□□□□□ -0.75
Lims1Q99JW4 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.38□□□□□ -0.75
Lims1Q99JW4 Gm3786-201ENSMUST00000202659 378 ntBASIC10.38□□□□□ -0.75
Lims1Q99JW4 Gm45433-201ENSMUST00000209386 247 ntBASIC10.38□□□□□ -0.75
Lims1Q99JW4 Gm6722-201ENSMUST00000221586 390 ntBASIC10.38□□□□□ -0.75
Lims1Q99JW4 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.38□□□□□ -0.75
Lims1Q99JW4 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.38□□□□□ -0.75
Lims1Q99JW4 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Lims1Q99JW4 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.37□□□□□ -0.75
Lims1Q99JW4 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lims1Q99JW4 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Gm11663-201ENSMUST00000117888 290 ntBASIC10.37□□□□□ -0.75
Lims1Q99JW4 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.37□□□□□ -0.75
Lims1Q99JW4 Gm15374-201ENSMUST00000119313 844 ntBASIC10.37□□□□□ -0.75
Lims1Q99JW4 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.37□□□□□ -0.75
Lims1Q99JW4 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.37□□□□□ -0.75
Lims1Q99JW4 Gm14017-201ENSMUST00000121934 386 ntBASIC10.37□□□□□ -0.75
Lims1Q99JW4 Mir1896-201ENSMUST00000122641 81 ntBASIC10.37□□□□□ -0.75
Lims1Q99JW4 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.37□□□□□ -0.75
Lims1Q99JW4 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lims1Q99JW4 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Gm24749-201ENSMUST00000157838 343 ntBASIC10.37□□□□□ -0.75
Lims1Q99JW4 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.37□□□□□ -0.75
Lims1Q99JW4 Olfml3-204ENSMUST00000169286 874 ntBASIC10.37□□□□□ -0.75
Lims1Q99JW4 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Lims1Q99JW4 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms