Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.26□□□□□ -0.45
TraipQ8VIG6 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Gm25063-201ENSMUST00000104666 94 ntBASIC12.26□□□□□ -0.45
TraipQ8VIG6 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Gm15171-201ENSMUST00000122191 334 ntBASIC12.26□□□□□ -0.45
TraipQ8VIG6 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.26□□□□□ -0.45
TraipQ8VIG6 Mir7051-201ENSMUST00000184167 73 ntBASIC12.26□□□□□ -0.45
TraipQ8VIG6 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Gm5298-201ENSMUST00000201122 892 ntBASIC12.26□□□□□ -0.45
TraipQ8VIG6 Gm3726-201ENSMUST00000203110 785 ntBASIC12.26□□□□□ -0.45
TraipQ8VIG6 Gm18561-201ENSMUST00000206027 804 ntBASIC12.26□□□□□ -0.45
TraipQ8VIG6 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.26□□□□□ -0.45
TraipQ8VIG6 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.26□□□□□ -0.45
TraipQ8VIG6 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
TraipQ8VIG6 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TraipQ8VIG6 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.26□□□□□ -0.45
TraipQ8VIG6 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Klhl41-201ENSMUST00000100050 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.26□□□□□ -0.45
TraipQ8VIG6 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TraipQ8VIG6 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.25□□□□□ -0.45
TraipQ8VIG6 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TraipQ8VIG6 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TraipQ8VIG6 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.25□□□□□ -0.45
TraipQ8VIG6 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.25□□□□□ -0.45
TraipQ8VIG6 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Gm12583-201ENSMUST00000120677 853 ntBASIC12.25□□□□□ -0.45
TraipQ8VIG6 Gm13117-201ENSMUST00000120894 691 ntBASIC12.25□□□□□ -0.45
TraipQ8VIG6 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Gm24992-201ENSMUST00000157412 130 ntBASIC12.25□□□□□ -0.45
TraipQ8VIG6 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.25□□□□□ -0.45
TraipQ8VIG6 Gm37028-201ENSMUST00000194276 107 ntBASIC12.25□□□□□ -0.45
TraipQ8VIG6 Gm30946-201ENSMUST00000198288 724 ntBASIC12.25□□□□□ -0.45
TraipQ8VIG6 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Gm3793-201ENSMUST00000204973 672 ntBASIC12.25□□□□□ -0.45
TraipQ8VIG6 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Gm39288-201ENSMUST00000210554 446 ntBASIC12.25□□□□□ -0.45
TraipQ8VIG6 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
TraipQ8VIG6 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.25□□□□□ -0.45
TraipQ8VIG6 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
TraipQ8VIG6 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.25□□□□□ -0.45
TraipQ8VIG6 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.25□□□□□ -0.45
TraipQ8VIG6 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
TraipQ8VIG6 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms