Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cchcr1Q8K2I2 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Gm38292-201ENSMUST00000192646 3045 ntBASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Gm14017-201ENSMUST00000121934 386 ntBASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Gm3150-201ENSMUST00000166418 204 ntBASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Gm8342-201ENSMUST00000209839 757 ntBASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cchcr1Q8K2I2 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Gm15617-201ENSMUST00000118973 771 ntBASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Olfml3-204ENSMUST00000169286 874 ntBASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Gm18539-201ENSMUST00000204745 1090 ntBASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Gm45186-201ENSMUST00000206874 478 ntBASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Gm14005-209ENSMUST00000224993 1832 ntBASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cchcr1Q8K2I2 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cchcr1Q8K2I2 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cchcr1Q8K2I2 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC13.42□□□□□ -0.26
Cchcr1Q8K2I2 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cchcr1Q8K2I2 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cchcr1Q8K2I2 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cchcr1Q8K2I2 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cchcr1Q8K2I2 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cchcr1Q8K2I2 Gm10110-202ENSMUST00000228705 3220 ntBASIC13.42□□□□□ -0.26
Cchcr1Q8K2I2 Nudt13-207ENSMUST00000224311 1574 ntBASIC13.42□□□□□ -0.26
Cchcr1Q8K2I2 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cchcr1Q8K2I2 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms