Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Gm45847-201ENSMUST00000209402 1880 ntTSL 3 BASIC10.91□□□□□ -0.66
Col12a1Q60847 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col12a1Q60847 n-R5s154-201ENSMUST00000122513 108 ntBASIC10.91□□□□□ -0.66
Col12a1Q60847 Gm5205-201ENSMUST00000182253 1003 ntBASIC10.91□□□□□ -0.66
Col12a1Q60847 Gm9273-201ENSMUST00000200606 715 ntBASIC10.91□□□□□ -0.66
Col12a1Q60847 Gm45308-201ENSMUST00000210610 415 ntBASIC10.91□□□□□ -0.66
Col12a1Q60847 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC10.91□□□□□ -0.66
Col12a1Q60847 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Col12a1Q60847 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col12a1Q60847 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.91□□□□□ -0.66
Col12a1Q60847 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col12a1Q60847 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col12a1Q60847 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Col12a1Q60847 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Col12a1Q60847 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col12a1Q60847 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col12a1Q60847 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col12a1Q60847 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col12a1Q60847 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col12a1Q60847 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC10.91□□□□□ -0.66
Col12a1Q60847 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col12a1Q60847 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC10.91□□□□□ -0.66
Col12a1Q60847 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col12a1Q60847 Gm8960-201ENSMUST00000219787 788 ntBASIC10.91□□□□□ -0.66
Col12a1Q60847 AC114585.2-201ENSMUST00000227693 486 ntBASIC10.91□□□□□ -0.66
Col12a1Q60847 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col12a1Q60847 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col12a1Q60847 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.91□□□□□ -0.66
Col12a1Q60847 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC10.91□□□□□ -0.66
Col12a1Q60847 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col12a1Q60847 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col12a1Q60847 Gm5174-201ENSMUST00000171131 1423 ntBASIC10.91□□□□□ -0.66
Col12a1Q60847 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col12a1Q60847 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col12a1Q60847 Gm15599-201ENSMUST00000122283 1345 ntBASIC10.91□□□□□ -0.66
Col12a1Q60847 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.91□□□□□ -0.66
Col12a1Q60847 Gm11191-201ENSMUST00000117231 610 ntBASIC10.91□□□□□ -0.66
Col12a1Q60847 Gm11380-201ENSMUST00000118067 560 ntBASIC10.91□□□□□ -0.66
Col12a1Q60847 Gm6517-201ENSMUST00000121056 511 ntBASIC10.91□□□□□ -0.66
Col12a1Q60847 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col12a1Q60847 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC10.91□□□□□ -0.66
Col12a1Q60847 Gm17107-201ENSMUST00000170983 553 ntBASIC10.91□□□□□ -0.66
Col12a1Q60847 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Col12a1Q60847 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Col12a1Q60847 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Col12a1Q60847 Gm18443-201ENSMUST00000185358 556 ntBASIC10.91□□□□□ -0.66
Col12a1Q60847 Gm44460-201ENSMUST00000196179 129 ntBASIC10.91□□□□□ -0.66
Col12a1Q60847 Gm42859-201ENSMUST00000199572 193 ntBASIC10.91□□□□□ -0.66
Col12a1Q60847 Gm7565-201ENSMUST00000203611 623 ntBASIC10.91□□□□□ -0.66
Col12a1Q60847 Gm29783-201ENSMUST00000219398 369 ntBASIC10.91□□□□□ -0.66
Col12a1Q60847 AC134793.1-202ENSMUST00000227444 803 ntBASIC10.91□□□□□ -0.66
Col12a1Q60847 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Col12a1Q60847 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Col12a1Q60847 Birc3-202ENSMUST00000115672 2909 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col12a1Q60847 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col12a1Q60847 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col12a1Q60847 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col12a1Q60847 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col12a1Q60847 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC10.9□□□□□ -0.66
Col12a1Q60847 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col12a1Q60847 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col12a1Q60847 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col12a1Q60847 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col12a1Q60847 Gm14650-201ENSMUST00000120400 889 ntBASIC10.9□□□□□ -0.66
Col12a1Q60847 Gm13071-201ENSMUST00000122237 376 ntBASIC10.9□□□□□ -0.66
Col12a1Q60847 Gm25804-201ENSMUST00000122785 188 ntBASIC10.9□□□□□ -0.66
Col12a1Q60847 Gm16193-201ENSMUST00000125903 778 ntTSL 3 BASIC10.9□□□□□ -0.66
Col12a1Q60847 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC10.9□□□□□ -0.66
Col12a1Q60847 Gm7539-201ENSMUST00000189789 630 ntBASIC10.9□□□□□ -0.66
Col12a1Q60847 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.9□□□□□ -0.66
Col12a1Q60847 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Col12a1Q60847 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col12a1Q60847 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col12a1Q60847 Gm9790-201ENSMUST00000054148 288 ntBASIC10.9□□□□□ -0.66
Col12a1Q60847 Olfr403-201ENSMUST00000076675 942 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Col12a1Q60847 Olfr43-201ENSMUST00000078936 1092 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Col12a1Q60847 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Col12a1Q60847 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col12a1Q60847 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col12a1Q60847 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col12a1Q60847 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC10.9□□□□□ -0.66
Col12a1Q60847 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col12a1Q60847 Gm19027-201ENSMUST00000187291 1355 ntBASIC10.9□□□□□ -0.66
Col12a1Q60847 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col12a1Q60847 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Col12a1Q60847 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col12a1Q60847 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col12a1Q60847 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC10.9□□□□□ -0.66
Col12a1Q60847 Crisp4-203ENSMUST00000115344 960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col12a1Q60847 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col12a1Q60847 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col12a1Q60847 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.9□□□□□ -0.66
Col12a1Q60847 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col12a1Q60847 Mir6930-201ENSMUST00000183859 68 ntBASIC10.9□□□□□ -0.66
Col12a1Q60847 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC10.9□□□□□ -0.66
Col12a1Q60847 Gm7210-201ENSMUST00000209309 1067 ntBASIC10.9□□□□□ -0.66
Col12a1Q60847 AC122459.4-201ENSMUST00000228654 551 ntBASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms