Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pfdn6Q03958 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pfdn6Q03958 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pfdn6Q03958 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Pfdn6Q03958 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Pfdn6Q03958 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Pfdn6Q03958 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pfdn6Q03958 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.46□□□□□ -0.58
Pfdn6Q03958 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pfdn6Q03958 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.46□□□□□ -0.58
Pfdn6Q03958 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Pfdn6Q03958 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.46□□□□□ -0.58
Pfdn6Q03958 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Pfdn6Q03958 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pfdn6Q03958 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.45□□□□□ -0.58
Pfdn6Q03958 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Pfdn6Q03958 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.45□□□□□ -0.58
Pfdn6Q03958 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.45□□□□□ -0.58
Pfdn6Q03958 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.45□□□□□ -0.58
Pfdn6Q03958 Gm43438-201ENSMUST00000198133 379 ntBASIC11.45□□□□□ -0.58
Pfdn6Q03958 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.45□□□□□ -0.58
Pfdn6Q03958 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn6Q03958 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.44□□□□□ -0.58
Pfdn6Q03958 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Gm14208-201ENSMUST00000119645 678 ntBASIC11.44□□□□□ -0.58
Pfdn6Q03958 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Gm13461-201ENSMUST00000120980 662 ntBASIC11.44□□□□□ -0.58
Pfdn6Q03958 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.44□□□□□ -0.58
Pfdn6Q03958 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.44□□□□□ -0.58
Pfdn6Q03958 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.44□□□□□ -0.58
Pfdn6Q03958 Gm6867-201ENSMUST00000219165 425 ntBASIC11.44□□□□□ -0.58
Pfdn6Q03958 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pfdn6Q03958 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.44□□□□□ -0.58
Pfdn6Q03958 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.44□□□□□ -0.58
Pfdn6Q03958 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Pfdn6Q03958 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms