Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.98□□□□□ -0.49
NcanP55066 Gm18124-201ENSMUST00000210695 706 ntBASIC11.98□□□□□ -0.49
NcanP55066 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC11.98□□□□□ -0.49
NcanP55066 AC140314.1-201ENSMUST00000219549 554 ntBASIC11.98□□□□□ -0.49
NcanP55066 Nsmce2-203ENSMUST00000227173 1122 ntBASIC11.98□□□□□ -0.49
NcanP55066 AC102523.1-201ENSMUST00000228706 1144 ntBASIC11.98□□□□□ -0.49
NcanP55066 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NcanP55066 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
NcanP55066 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC11.98□□□□□ -0.49
NcanP55066 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
NcanP55066 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
NcanP55066 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NcanP55066 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
NcanP55066 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NcanP55066 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NcanP55066 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NcanP55066 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NcanP55066 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
NcanP55066 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NcanP55066 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
NcanP55066 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC11.98□□□□□ -0.49
NcanP55066 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NcanP55066 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NcanP55066 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NcanP55066 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NcanP55066 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NcanP55066 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NcanP55066 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
NcanP55066 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
NcanP55066 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NcanP55066 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
NcanP55066 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NcanP55066 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.97□□□□□ -0.49
NcanP55066 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NcanP55066 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.97□□□□□ -0.49
NcanP55066 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
NcanP55066 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NcanP55066 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NcanP55066 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NcanP55066 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.97□□□□□ -0.49
NcanP55066 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.97□□□□□ -0.49
NcanP55066 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NcanP55066 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
NcanP55066 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
NcanP55066 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
NcanP55066 Gm16165-201ENSMUST00000160140 795 ntBASIC11.97□□□□□ -0.49
NcanP55066 Gm5873-201ENSMUST00000177157 1066 ntBASIC11.97□□□□□ -0.49
NcanP55066 Gm8601-201ENSMUST00000182096 909 ntBASIC11.97□□□□□ -0.49
NcanP55066 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NcanP55066 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NcanP55066 Gm9619-201ENSMUST00000211587 762 ntBASIC11.97□□□□□ -0.49
NcanP55066 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.97□□□□□ -0.49
NcanP55066 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NcanP55066 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NcanP55066 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NcanP55066 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NcanP55066 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.97□□□□□ -0.49
NcanP55066 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NcanP55066 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NcanP55066 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.97□□□□□ -0.49
NcanP55066 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NcanP55066 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
NcanP55066 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
NcanP55066 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NcanP55066 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NcanP55066 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
NcanP55066 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
NcanP55066 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.96□□□□□ -0.49
NcanP55066 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
NcanP55066 Gm13608-201ENSMUST00000121807 1406 ntBASIC11.96□□□□□ -0.49
NcanP55066 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
NcanP55066 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
NcanP55066 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NcanP55066 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NcanP55066 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
NcanP55066 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
NcanP55066 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NcanP55066 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NcanP55066 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
NcanP55066 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.96□□□□□ -0.49
NcanP55066 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NcanP55066 Ighv13-1-201ENSMUST00000103480 294 ntBASIC11.96□□□□□ -0.49
NcanP55066 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC11.96□□□□□ -0.49
NcanP55066 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NcanP55066 Gm14176-201ENSMUST00000121302 477 ntBASIC11.96□□□□□ -0.49
NcanP55066 Gm13505-201ENSMUST00000121666 817 ntBASIC11.96□□□□□ -0.49
NcanP55066 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC11.96□□□□□ -0.49
NcanP55066 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NcanP55066 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NcanP55066 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC11.96□□□□□ -0.49
NcanP55066 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC11.96□□□□□ -0.49
NcanP55066 Gm27316-201ENSMUST00000184884 277 ntBASIC11.96□□□□□ -0.49
NcanP55066 Gm28671-201ENSMUST00000187036 692 ntBASIC11.96□□□□□ -0.49
NcanP55066 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.96□□□□□ -0.49
NcanP55066 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.96□□□□□ -0.49
NcanP55066 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NcanP55066 Gm23458-201ENSMUST00000083257 169 ntBASIC11.96□□□□□ -0.49
NcanP55066 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
NcanP55066 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NcanP55066 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms