Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cd28P31041 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cd28P31041 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cd28P31041 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Cd28P31041 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cd28P31041 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Cd28P31041 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Cd28P31041 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Cd28P31041 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Cd28P31041 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Cd28P31041 Gm12015-201ENSMUST00000117065 843 ntBASIC9.98□□□□□ -0.81
Cd28P31041 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC9.98□□□□□ -0.81
Cd28P31041 Gm17150-201ENSMUST00000165577 381 ntBASIC9.98□□□□□ -0.81
Cd28P31041 Gm8602-201ENSMUST00000184045 607 ntBASIC9.98□□□□□ -0.81
Cd28P31041 Gm29164-201ENSMUST00000185454 1024 ntBASIC9.98□□□□□ -0.81
Cd28P31041 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC9.98□□□□□ -0.81
Cd28P31041 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
Cd28P31041 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Cd28P31041 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Cd28P31041 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cd28P31041 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd28P31041 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC9.97□□□□□ -0.81
Cd28P31041 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cd28P31041 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd28P31041 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Cd28P31041 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC9.97□□□□□ -0.81
Cd28P31041 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd28P31041 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cd28P31041 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd28P31041 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cd28P31041 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd28P31041 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC9.97□□□□□ -0.81
Cd28P31041 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd28P31041 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.97□□□□□ -0.81
Cd28P31041 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cd28P31041 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Cd28P31041 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC9.97□□□□□ -0.81
Cd28P31041 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC9.97□□□□□ -0.81
Cd28P31041 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC9.97□□□□□ -0.81
Cd28P31041 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cd28P31041 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
Cd28P31041 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Cd28P31041 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Cd28P31041 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cd28P31041 Gm27514-201ENSMUST00000183692 110 ntBASIC9.97□□□□□ -0.81
Cd28P31041 Mir8093-201ENSMUST00000185043 137 ntBASIC9.97□□□□□ -0.81
Cd28P31041 Gm7293-201ENSMUST00000216682 1007 ntBASIC9.97□□□□□ -0.81
Cd28P31041 Gm17823-201ENSMUST00000217830 1006 ntBASIC9.97□□□□□ -0.81
Cd28P31041 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd28P31041 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd28P31041 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd28P31041 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd28P31041 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Cd28P31041 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Cd28P31041 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd28P31041 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cd28P31041 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC9.97□□□□□ -0.81
Cd28P31041 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cd28P31041 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cd28P31041 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cd28P31041 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cd28P31041 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cd28P31041 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC9.96□□□□□ -0.81
Cd28P31041 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.81
Cd28P31041 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cd28P31041 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
Cd28P31041 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cd28P31041 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Cd28P31041 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Cd28P31041 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cd28P31041 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Cd28P31041 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cd28P31041 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC9.96□□□□□ -0.81
Cd28P31041 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cd28P31041 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms