Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx1P18111 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx1P18111 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
Cdx1P18111 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx1P18111 Gm4366-201ENSMUST00000201488 1342 ntBASIC9.24□□□□□ -0.93
Cdx1P18111 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx1P18111 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC9.24□□□□□ -0.93
Cdx1P18111 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx1P18111 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Cdx1P18111 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Cdx1P18111 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx1P18111 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Cdx1P18111 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx1P18111 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
Cdx1P18111 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cdx1P18111 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.24□□□□□ -0.93
Cdx1P18111 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Cdx1P18111 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Cdx1P18111 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Cdx1P18111 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC9.23□□□□□ -0.93
Cdx1P18111 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC9.23□□□□□ -0.93
Cdx1P18111 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Cdx1P18111 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Gm11930-201ENSMUST00000117788 190 ntBASIC9.23□□□□□ -0.93
Cdx1P18111 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Cdx1P18111 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC9.23□□□□□ -0.93
Cdx1P18111 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Cdx1P18111 Gm5597-201ENSMUST00000182353 1193 ntBASIC9.23□□□□□ -0.93
Cdx1P18111 Gm2546-201ENSMUST00000182630 991 ntBASIC9.23□□□□□ -0.93
Cdx1P18111 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC9.23□□□□□ -0.93
Cdx1P18111 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Gm38317-201ENSMUST00000195564 343 ntBASIC9.23□□□□□ -0.93
Cdx1P18111 Gm43138-201ENSMUST00000199123 708 ntBASIC9.23□□□□□ -0.93
Cdx1P18111 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC9.23□□□□□ -0.93
Cdx1P18111 AC155637.1-201ENSMUST00000218560 636 ntBASIC9.23□□□□□ -0.93
Cdx1P18111 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC9.23□□□□□ -0.93
Cdx1P18111 Nsd1-205ENSMUST00000224693 852 ntBASIC9.23□□□□□ -0.93
Cdx1P18111 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Cdx1P18111 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Cdx1P18111 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Gm8228-201ENSMUST00000189949 2192 ntBASIC9.23□□□□□ -0.93
Cdx1P18111 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
Cdx1P18111 Nln-205ENSMUST00000224945 2486 ntBASIC9.23□□□□□ -0.93
Cdx1P18111 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Cdx1P18111 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC9.23□□□□□ -0.93
Cdx1P18111 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Cdx1P18111 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Cdx1P18111 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Cdx1P18111 Gm19221-201ENSMUST00000221827 1477 ntBASIC9.22□□□□□ -0.93
Cdx1P18111 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Cdx1P18111 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC9.22□□□□□ -0.93
Cdx1P18111 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC9.22□□□□□ -0.93
Cdx1P18111 Gm44798-201ENSMUST00000208123 2410 ntBASIC9.22□□□□□ -0.93
Cdx1P18111 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.22□□□□□ -0.93
Cdx1P18111 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Cdx1P18111 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC9.22□□□□□ -0.93
Cdx1P18111 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cdx1P18111 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC9.22□□□□□ -0.93
Cdx1P18111 Gm14130-201ENSMUST00000118417 987 ntBASIC9.22□□□□□ -0.93
Cdx1P18111 Gm13665-201ENSMUST00000120830 528 ntBASIC9.22□□□□□ -0.93
Cdx1P18111 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms