Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxc9P09633 Gm25569-201ENSMUST00000157175 131 ntBASIC14.69□□□□□ -0.06
Hoxc9P09633 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC14.69□□□□□ -0.06
Hoxc9P09633 Mir8091-201ENSMUST00000183602 139 ntBASIC14.69□□□□□ -0.06
Hoxc9P09633 Gm19918-201ENSMUST00000194858 400 ntBASIC14.69□□□□□ -0.06
Hoxc9P09633 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC14.69□□□□□ -0.06
Hoxc9P09633 AC158388.3-202ENSMUST00000225517 775 ntBASIC14.69□□□□□ -0.06
Hoxc9P09633 AC142266.1-201ENSMUST00000228107 415 ntBASIC14.69□□□□□ -0.06
Hoxc9P09633 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxc9P09633 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxc9P09633 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Hoxc9P09633 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxc9P09633 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxc9P09633 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxc9P09633 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxc9P09633 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxc9P09633 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxc9P09633 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxc9P09633 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxc9P09633 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxc9P09633 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxc9P09633 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxc9P09633 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxc9P09633 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxc9P09633 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Hoxc9P09633 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxc9P09633 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxc9P09633 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Hoxc9P09633 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxc9P09633 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC14.68□□□□□ -0.06
Hoxc9P09633 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxc9P09633 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxc9P09633 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxc9P09633 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxc9P09633 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Hoxc9P09633 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxc9P09633 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxc9P09633 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Hoxc9P09633 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxc9P09633 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Hoxc9P09633 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC14.68□□□□□ -0.06
Hoxc9P09633 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxc9P09633 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC14.68□□□□□ -0.06
Hoxc9P09633 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxc9P09633 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC14.68□□□□□ -0.06
Hoxc9P09633 Gm26119-201ENSMUST00000175601 104 ntBASIC14.68□□□□□ -0.06
Hoxc9P09633 Gm42779-201ENSMUST00000198807 406 ntBASIC14.68□□□□□ -0.06
Hoxc9P09633 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC14.68□□□□□ -0.06
Hoxc9P09633 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxc9P09633 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxc9P09633 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC14.68□□□□□ -0.06
Hoxc9P09633 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxc9P09633 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC14.68□□□□□ -0.06
Hoxc9P09633 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxc9P09633 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxc9P09633 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Hoxc9P09633 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Hoxc9P09633 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hoxc9P09633 Gm13135-201ENSMUST00000117628 3121 ntBASIC14.68□□□□□ -0.06
Hoxc9P09633 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.68□□□□□ -0.06
Hoxc9P09633 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.67□□□□□ -0.06
Hoxc9P09633 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxc9P09633 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxc9P09633 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxc9P09633 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxc9P09633 Gm19680-201ENSMUST00000095050 1513 ntBASIC14.67□□□□□ -0.06
Hoxc9P09633 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.67□□□□□ -0.06
Hoxc9P09633 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxc9P09633 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC14.67□□□□□ -0.06
Hoxc9P09633 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC14.67□□□□□ -0.06
Hoxc9P09633 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxc9P09633 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxc9P09633 Gm18014-201ENSMUST00000183369 817 ntBASIC14.67□□□□□ -0.06
Hoxc9P09633 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxc9P09633 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxc9P09633 Gm7880-201ENSMUST00000203748 871 ntBASIC14.67□□□□□ -0.06
Hoxc9P09633 Gm2448-201ENSMUST00000207080 559 ntBASIC14.67□□□□□ -0.06
Hoxc9P09633 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC14.67□□□□□ -0.06
Hoxc9P09633 Gm26782-203ENSMUST00000227103 751 ntBASIC14.67□□□□□ -0.06
Hoxc9P09633 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Hoxc9P09633 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Hoxc9P09633 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxc9P09633 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxc9P09633 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxc9P09633 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxc9P09633 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxc9P09633 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxc9P09633 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxc9P09633 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxc9P09633 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxc9P09633 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxc9P09633 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxc9P09633 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hoxc9P09633 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Hoxc9P09633 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Hoxc9P09633 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC14.66□□□□□ -0.06
Hoxc9P09633 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxc9P09633 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hoxc9P09633 AC124397.2-201ENSMUST00000225575 2215 ntBASIC14.66□□□□□ -0.06
Hoxc9P09633 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms