Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Gm12217-201ENSMUST00000118858 696 ntBASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Gm43152-201ENSMUST00000202495 1638 ntBASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Chrna9G3X8Z7 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Gm14592-201ENSMUST00000117201 560 ntBASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Gm12997-201ENSMUST00000120207 640 ntBASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Gm19246-201ENSMUST00000173599 255 ntBASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Gm7741-201ENSMUST00000181445 989 ntBASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Gm9257-201ENSMUST00000221254 232 ntBASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chrna9G3X8Z7 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 Gm23694-201ENSMUST00000179335 110 ntBASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna9G3X8Z7 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms