Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 AC107711.4-201ENSMUST00000228948 440 ntBASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Gm5278-201ENSMUST00000055957 552 ntBASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Gm8420-201ENSMUST00000097103 598 ntBASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col4a6B1AVK5 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Gm11736-201ENSMUST00000121468 505 ntBASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Gm24140-201ENSMUST00000122773 326 ntBASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Gm7211-201ENSMUST00000172692 1118 ntBASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Gm7833-201ENSMUST00000183288 990 ntBASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 CT030035.1-201ENSMUST00000223964 935 ntBASIC11.49□□□□□ -0.57
Col4a6B1AVK5 AC133517.1-201ENSMUST00000225825 594 ntBASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Gm16441-201ENSMUST00000138176 924 ntBASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Gm6038-201ENSMUST00000154310 948 ntBASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Gm23582-201ENSMUST00000158530 139 ntBASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Gm6216-201ENSMUST00000182390 687 ntBASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Gm27444-201ENSMUST00000184157 137 ntBASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Mir8111-201ENSMUST00000184463 137 ntBASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Gm37858-201ENSMUST00000192759 1231 ntBASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Gm38233-201ENSMUST00000194259 807 ntBASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Gm7047-201ENSMUST00000196224 1063 ntBASIC11.49□□□□□ -0.57
Col4a6B1AVK5 AC124613.1-201ENSMUST00000198711 88 ntBASIC11.49□□□□□ -0.57
Col4a6B1AVK5 AC140314.1-201ENSMUST00000219549 554 ntBASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Gm18042-201ENSMUST00000219887 790 ntBASIC11.49□□□□□ -0.57
Col4a6B1AVK5 AC125409.3-201ENSMUST00000223488 653 ntBASIC11.49□□□□□ -0.57
Col4a6B1AVK5 AC154461.3-201ENSMUST00000224831 573 ntBASIC11.49□□□□□ -0.57
Col4a6B1AVK5 AC141884.2-201ENSMUST00000228811 775 ntBASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Col4a6B1AVK5 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Gm12716-201ENSMUST00000120606 1354 ntBASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col4a6B1AVK5 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms