Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Gm3550W4VSN7 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Gm3550W4VSN7 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Gm3550W4VSN7 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Gm3550W4VSN7 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Gm3550W4VSN7 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Gm3550W4VSN7 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 AC159195.3-201ENSMUST00000225162 2211 ntBASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Gm5846-201ENSMUST00000193146 1414 ntBASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.67□□□□□ -0.86
Gm3550W4VSN7 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Gm42427-201ENSMUST00000200473 5292 ntBASIC9.67□□□□□ -0.86
Gm3550W4VSN7 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Gm14724-201ENSMUST00000118400 537 ntBASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Gm8566-201ENSMUST00000120174 465 ntBASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Gm18730-201ENSMUST00000218038 343 ntBASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 AC154314.2-201ENSMUST00000223677 3502 ntBASIC9.67□□□□□ -0.86
Gm3550W4VSN7 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Gm3550W4VSN7 AC124433.1-202ENSMUST00000224762 1535 ntBASIC9.66□□□□□ -0.86
Gm3550W4VSN7 AC165351.1-201ENSMUST00000219078 2020 ntBASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Gm11439-201ENSMUST00000118598 409 ntBASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Gm11783-201ENSMUST00000119549 885 ntBASIC9.66□□□□□ -0.86
Gm3550W4VSN7 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Gm12196-201ENSMUST00000120954 262 ntBASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Gm8815-201ENSMUST00000173809 620 ntBASIC9.66□□□□□ -0.86
Gm3550W4VSN7 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Gm16505-201ENSMUST00000179981 232 ntBASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Gm18212-201ENSMUST00000211678 889 ntBASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC9.66□□□□□ -0.86
Gm3550W4VSN7 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 133.1 ms