Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.53□□□□□ -0.4
Cfap53Q9D439 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cfap53Q9D439 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cfap53Q9D439 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cfap53Q9D439 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.52□□□□□ -0.4
Cfap53Q9D439 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Cfap53Q9D439 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cfap53Q9D439 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cfap53Q9D439 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cfap53Q9D439 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cfap53Q9D439 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Gm8731-201ENSMUST00000118088 412 ntBASIC12.52□□□□□ -0.41
Cfap53Q9D439 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Gm8459-201ENSMUST00000162504 760 ntBASIC12.52□□□□□ -0.41
Cfap53Q9D439 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.52□□□□□ -0.41
Cfap53Q9D439 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.52□□□□□ -0.41
Cfap53Q9D439 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.52□□□□□ -0.41
Cfap53Q9D439 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.52□□□□□ -0.41
Cfap53Q9D439 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cfap53Q9D439 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cfap53Q9D439 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cfap53Q9D439 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cfap53Q9D439 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cfap53Q9D439 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cfap53Q9D439 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cfap53Q9D439 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cfap53Q9D439 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cfap53Q9D439 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cfap53Q9D439 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cfap53Q9D439 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cfap53Q9D439 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cfap53Q9D439 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cfap53Q9D439 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cfap53Q9D439 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.51□□□□□ -0.41
Cfap53Q9D439 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cfap53Q9D439 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cfap53Q9D439 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.51□□□□□ -0.41
Cfap53Q9D439 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cfap53Q9D439 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cfap53Q9D439 Gm4909-201ENSMUST00000118749 794 ntBASIC12.51□□□□□ -0.41
Cfap53Q9D439 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.51□□□□□ -0.41
Cfap53Q9D439 Gm7150-201ENSMUST00000122032 981 ntBASIC12.51□□□□□ -0.41
Cfap53Q9D439 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cfap53Q9D439 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cfap53Q9D439 Gm20495-201ENSMUST00000173902 235 ntBASIC12.51□□□□□ -0.41
Cfap53Q9D439 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.51□□□□□ -0.41
Cfap53Q9D439 Gm12407-201ENSMUST00000180219 324 ntBASIC12.51□□□□□ -0.41
Cfap53Q9D439 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.51□□□□□ -0.41
Cfap53Q9D439 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cfap53Q9D439 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms