Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ssr1Q9CY50 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssr1Q9CY50 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssr1Q9CY50 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ssr1Q9CY50 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssr1Q9CY50 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ssr1Q9CY50 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ssr1Q9CY50 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Gm14723-201ENSMUST00000118686 215 ntBASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Gm15004-201ENSMUST00000119192 630 ntBASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Gm11660-201ENSMUST00000120955 412 ntBASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Gm15276-201ENSMUST00000145953 498 ntBASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Gm20482-202ENSMUST00000174729 825 ntBASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Gm43758-201ENSMUST00000199500 367 ntBASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Gm43002-201ENSMUST00000200310 155 ntBASIC12.43□□□□□ -0.42
Ssr1Q9CY50 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Olfr582-201ENSMUST00000098212 960 ntBASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ssr1Q9CY50 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Gm45889-202ENSMUST00000211255 2358 ntTSL 5 BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Gm24255-201ENSMUST00000104481 128 ntBASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.42□□□□□ -0.42
Ssr1Q9CY50 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Rps4l-202ENSMUST00000204242 789 ntBASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Gm3961-201ENSMUST00000204425 994 ntBASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Gm44967-201ENSMUST00000207047 631 ntBASIC12.42□□□□□ -0.42
Ssr1Q9CY50 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ssr1Q9CY50 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms