Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Snord17-201ENSMUST00000104526 238 ntBASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Gm8111-201ENSMUST00000117659 987 ntBASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Gm12218-201ENSMUST00000117666 399 ntBASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Gm9062-201ENSMUST00000117712 727 ntBASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Gm11956-201ENSMUST00000119525 512 ntBASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.54□□□□□ -0.4
Trim9Q8C7M3 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Gm37981-201ENSMUST00000194280 535 ntBASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.54□□□□□ -0.4
Trim9Q8C7M3 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Gm25492-201ENSMUST00000157383 129 ntBASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Gm4654-201ENSMUST00000183305 982 ntBASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Gm29067-201ENSMUST00000190821 470 ntBASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Gm43186-201ENSMUST00000198130 824 ntBASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim9Q8C7M3 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim9Q8C7M3 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim9Q8C7M3 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim9Q8C7M3 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.52□□□□□ -0.4
Trim9Q8C7M3 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trim9Q8C7M3 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim9Q8C7M3 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim9Q8C7M3 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim9Q8C7M3 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trim9Q8C7M3 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Gm15615-201ENSMUST00000118876 198 ntBASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim9Q8C7M3 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms