Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Gm13315-201ENSMUST00000120376 991 ntBASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Gm8908-201ENSMUST00000121633 1024 ntBASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Gm38341-201ENSMUST00000195357 515 ntBASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Gm44958-201ENSMUST00000203734 736 ntBASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Gm30285-201ENSMUST00000214614 422 ntBASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Gm6714-201ENSMUST00000218677 2330 ntBASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 AC122197.2-201ENSMUST00000219196 1635 ntBASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Tsen54Q8C2A2 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Gm45342-201ENSMUST00000210903 1363 ntBASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Gm23912-201ENSMUST00000104687 87 ntBASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Gm12314-201ENSMUST00000118104 538 ntBASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Gm11700-201ENSMUST00000119409 403 ntBASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Gm13875-201ENSMUST00000120162 282 ntBASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Gm11597-201ENSMUST00000121423 964 ntBASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Tsen54Q8C2A2 Gm5950-201ENSMUST00000213337 772 ntBASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms