Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC9.37□□□□□ -0.91
Smco3Q8BQM7 Ctnnd1-215ENSMUST00000111689 5961 ntTSL 5 BASIC9.37□□□□□ -0.91
Smco3Q8BQM7 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco3Q8BQM7 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco3Q8BQM7 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco3Q8BQM7 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco3Q8BQM7 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco3Q8BQM7 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC9.37□□□□□ -0.91
Smco3Q8BQM7 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.37□□□□□ -0.91
Smco3Q8BQM7 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Smco3Q8BQM7 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Gm28693-201ENSMUST00000189622 2638 ntBASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 AC129931.1-201ENSMUST00000228865 1861 ntBASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Pcdh15-226ENSMUST00000151116 6287 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 AC165351.1-201ENSMUST00000219078 2020 ntBASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Gm4986-201ENSMUST00000119731 549 ntBASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Gm16379-201ENSMUST00000161469 348 ntBASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Gm8762-201ENSMUST00000193486 339 ntBASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Gm9299-201ENSMUST00000206392 1140 ntBASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Smco3Q8BQM7 Sardh-202ENSMUST00000102886 4521 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Gm42602-201ENSMUST00000200288 3224 ntBASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Vma21-201ENSMUST00000114575 4290 ntTSL 2 BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Gm19221-201ENSMUST00000221827 1477 ntBASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Gm37737-201ENSMUST00000195013 1638 ntBASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Slc35b4-201ENSMUST00000019143 6253 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco3Q8BQM7 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms