Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim6Q8BGE7 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.1□□□□□ -0.47
Trim6Q8BGE7 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Gm26286-201ENSMUST00000104166 134 ntBASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Gm12241-201ENSMUST00000118330 726 ntBASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Gm5745-201ENSMUST00000183748 313 ntBASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Gm43966-201ENSMUST00000203301 612 ntBASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Gm5705-201ENSMUST00000066241 711 ntBASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim6Q8BGE7 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Gm32999-201ENSMUST00000192693 562 ntBASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Rprl1-202ENSMUST00000198476 238 ntBASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Gm6439-201ENSMUST00000199849 862 ntBASIC12.09□□□□□ -0.47
Trim6Q8BGE7 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim6Q8BGE7 Gm42427-201ENSMUST00000200473 5292 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms