Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Col12a1Q60847 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col12a1Q60847 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Col12a1Q60847 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col12a1Q60847 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col12a1Q60847 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col12a1Q60847 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Col12a1Q60847 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col12a1Q60847 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col12a1Q60847 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.94□□□□□ -0.66
Col12a1Q60847 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col12a1Q60847 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col12a1Q60847 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Col12a1Q60847 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Col12a1Q60847 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col12a1Q60847 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Col12a1Q60847 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC10.93□□□□□ -0.66
Col12a1Q60847 Gm15570-201ENSMUST00000122093 625 ntBASIC10.93□□□□□ -0.66
Col12a1Q60847 Gm6686-201ENSMUST00000178455 258 ntBASIC10.93□□□□□ -0.66
Col12a1Q60847 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC10.93□□□□□ -0.66
Col12a1Q60847 AC122024.3-201ENSMUST00000217719 294 ntBASIC10.93□□□□□ -0.66
Col12a1Q60847 Gm3791-201ENSMUST00000220790 768 ntBASIC10.93□□□□□ -0.66
Col12a1Q60847 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col12a1Q60847 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col12a1Q60847 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col12a1Q60847 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col12a1Q60847 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col12a1Q60847 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.93□□□□□ -0.66
Col12a1Q60847 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Col12a1Q60847 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col12a1Q60847 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Col12a1Q60847 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col12a1Q60847 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC10.93□□□□□ -0.66
Col12a1Q60847 Gm23916-201ENSMUST00000158484 399 ntBASIC10.93□□□□□ -0.66
Col12a1Q60847 Gm5766-202ENSMUST00000161633 799 ntBASIC10.93□□□□□ -0.66
Col12a1Q60847 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Col12a1Q60847 Gm5873-201ENSMUST00000177157 1066 ntBASIC10.93□□□□□ -0.66
Col12a1Q60847 Gm20474-201ENSMUST00000180089 596 ntBASIC10.93□□□□□ -0.66
Col12a1Q60847 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC10.93□□□□□ -0.66
Col12a1Q60847 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.93□□□□□ -0.66
Col12a1Q60847 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col12a1Q60847 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col12a1Q60847 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col12a1Q60847 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col12a1Q60847 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col12a1Q60847 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col12a1Q60847 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col12a1Q60847 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Col12a1Q60847 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.93□□□□□ -0.66
Col12a1Q60847 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col12a1Q60847 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col12a1Q60847 Gm6276-201ENSMUST00000120159 579 ntBASIC10.93□□□□□ -0.66
Col12a1Q60847 Gm4917-201ENSMUST00000121452 650 ntBASIC10.93□□□□□ -0.66
Col12a1Q60847 Gm21963-201ENSMUST00000179519 330 ntBASIC10.93□□□□□ -0.66
Col12a1Q60847 Ighv1-11-201ENSMUST00000191801 351 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Col12a1Q60847 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC10.93□□□□□ -0.66
Col12a1Q60847 Gm5311-201ENSMUST00000203518 709 ntBASIC10.93□□□□□ -0.66
Col12a1Q60847 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col12a1Q60847 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC10.93□□□□□ -0.66
Col12a1Q60847 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Col12a1Q60847 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Col12a1Q60847 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col12a1Q60847 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Col12a1Q60847 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Gm28453-201ENSMUST00000185556 1323 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Gm12047-201ENSMUST00000117561 944 ntBASIC10.92□□□□□ -0.66
Col12a1Q60847 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Col12a1Q60847 Gm34248-201ENSMUST00000200027 474 ntBASIC10.92□□□□□ -0.66
Col12a1Q60847 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC10.92□□□□□ -0.66
Col12a1Q60847 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC10.92□□□□□ -0.66
Col12a1Q60847 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Gm10020-201ENSMUST00000081993 612 ntBASIC10.92□□□□□ -0.66
Col12a1Q60847 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC10.92□□□□□ -0.66
Col12a1Q60847 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Gm14630-201ENSMUST00000118057 246 ntBASIC10.92□□□□□ -0.66
Col12a1Q60847 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC10.92□□□□□ -0.66
Col12a1Q60847 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC10.92□□□□□ -0.66
Col12a1Q60847 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Crip1-205ENSMUST00000199089 509 ntTSL 3 BASIC10.92□□□□□ -0.66
Col12a1Q60847 Polr2k-201ENSMUST00000057177 601 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Syna-201ENSMUST00000149604 2026 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Col12a1Q60847 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Col12a1Q60847 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms