Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Gm12337-201ENSMUST00000119634 400 ntBASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Gm15196-201ENSMUST00000121406 482 ntBASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Gm11993-201ENSMUST00000121861 820 ntBASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Gm11942-201ENSMUST00000180255 345 ntBASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Mir7035-201ENSMUST00000184713 82 ntBASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Gm43547-201ENSMUST00000197729 328 ntBASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Gm43854-201ENSMUST00000200418 394 ntBASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 AC159246.1-201ENSMUST00000214478 249 ntBASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc85aQ5SP85 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Gm7069-201ENSMUST00000182418 1008 ntBASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Gm9369-201ENSMUST00000196009 733 ntBASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Gm18035-201ENSMUST00000211962 589 ntBASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 CT010480.2-201ENSMUST00000225424 737 ntBASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc85aQ5SP85 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85aQ5SP85 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85aQ5SP85 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85aQ5SP85 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85aQ5SP85 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85aQ5SP85 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85aQ5SP85 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85aQ5SP85 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85aQ5SP85 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85aQ5SP85 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccdc85aQ5SP85 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85aQ5SP85 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.66□□□□□ -0.38
Ccdc85aQ5SP85 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85aQ5SP85 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85aQ5SP85 Gm6024-201ENSMUST00000117850 1558 ntBASIC12.66□□□□□ -0.38
Ccdc85aQ5SP85 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85aQ5SP85 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ccdc85aQ5SP85 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85aQ5SP85 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85aQ5SP85 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85aQ5SP85 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms