Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 Elmo1-201ENSMUST00000072519 5464 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 Treml2-201ENSMUST00000170941 4509 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 Sptbn1-203ENSMUST00000102838 9107 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 Clcn1-201ENSMUST00000031894 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 AC122273.1-201ENSMUST00000213634 2327 ntBASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 Scnn1a-201ENSMUST00000081440 3499 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 Rassf2-202ENSMUST00000103182 4589 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 Car12-201ENSMUST00000071889 3716 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 Thrb-202ENSMUST00000022304 6200 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cks1brtQ3UNC9 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Itgam-201ENSMUST00000064821 4682 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Ep400-203ENSMUST00000112435 10420 ntTSL 5 BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Rnf38-201ENSMUST00000045793 5012 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 CT009601.1-201ENSMUST00000225567 2705 ntBASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Gm6714-201ENSMUST00000218677 2330 ntBASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Gm8000-201ENSMUST00000188378 592 ntBASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Gm38241-201ENSMUST00000192641 898 ntBASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Tulp4-209ENSMUST00000149756 8784 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Klhdc7a-201ENSMUST00000105031 7807 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Adamtsl4-201ENSMUST00000015994 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Zfp292-201ENSMUST00000047950 9986 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Atp7b-201ENSMUST00000006742 6505 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cks1brtQ3UNC9 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cks1brtQ3UNC9 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Cks1brtQ3UNC9 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC8.11□□□□□ -1.11
Cks1brtQ3UNC9 Gm43127-201ENSMUST00000195890 2789 ntBASIC8.11□□□□□ -1.11
Cks1brtQ3UNC9 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cks1brtQ3UNC9 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Cks1brtQ3UNC9 Gm38271-201ENSMUST00000192296 1603 ntBASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms