Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rps28P62858 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rps28P62858 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC6.47□□□□□ -1.37
Rps28P62858 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rps28P62858 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC6.47□□□□□ -1.37
Rps28P62858 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
Rps28P62858 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rps28P62858 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rps28P62858 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rps28P62858 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
Rps28P62858 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rps28P62858 Pds5a-201ENSMUST00000031104 4146 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Rps28P62858 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC6.47□□□□□ -1.37
Rps28P62858 Fkbp5-202ENSMUST00000114792 3858 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Rps28P62858 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rps28P62858 Gm37694-201ENSMUST00000191696 2133 ntBASIC6.47□□□□□ -1.37
Rps28P62858 Gm9244-201ENSMUST00000056767 2129 ntBASIC6.47□□□□□ -1.37
Rps28P62858 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rps28P62858 Pln-202ENSMUST00000163319 1715 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Rps28P62858 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rps28P62858 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC6.47□□□□□ -1.37
Rps28P62858 Gm45728-201ENSMUST00000211475 2979 ntBASIC6.47□□□□□ -1.37
Rps28P62858 Gm19127-201ENSMUST00000207067 2445 ntBASIC6.47□□□□□ -1.37
Rps28P62858 Gm44570-201ENSMUST00000207526 3698 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rps28P62858 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rps28P62858 Gm10118-201ENSMUST00000079279 2569 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Rps28P62858 Prdm16-204ENSMUST00000105636 8426 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rps28P62858 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rps28P62858 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rps28P62858 Prpf40a-201ENSMUST00000076313 7374 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Rps28P62858 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Rps28P62858 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
Rps28P62858 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Rps28P62858 Gm38123-201ENSMUST00000194990 2779 ntBASIC6.46□□□□□ -1.37
Rps28P62858 Tsr2-202ENSMUST00000112683 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Rps28P62858 Itga9-202ENSMUST00000124360 1935 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Rps28P62858 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Rps28P62858 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Rps28P62858 Wfikkn2-201ENSMUST00000061469 3516 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Rps28P62858 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Rps28P62858 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Rps28P62858 Nim1k-201ENSMUST00000178142 4103 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Rps28P62858 Peg13-201ENSMUST00000202826 4725 ntBASIC6.46□□□□□ -1.37
Rps28P62858 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Rps28P62858 Dtnbos-201ENSMUST00000173847 1662 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Rps28P62858 Gm46218-202ENSMUST00000215520 1956 ntBASIC6.46□□□□□ -1.37
Rps28P62858 AC160413.2-201ENSMUST00000217790 2280 ntBASIC6.46□□□□□ -1.37
Rps28P62858 Epb41-205ENSMUST00000105972 2577 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
Rps28P62858 Rpgr-205ENSMUST00000115533 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Pdgfra-208ENSMUST00000202681 2876 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Arpp19-205ENSMUST00000168166 3944 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
Rps28P62858 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Washc4-201ENSMUST00000038388 5858 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Rps28P62858 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
Rps28P62858 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Rps28P62858 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC6.46□□□□□ -1.38
Rps28P62858 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC6.46□□□□□ -1.38
Rps28P62858 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
Rps28P62858 Gm27813-201ENSMUST00000184343 354 ntBASIC6.46□□□□□ -1.38
Rps28P62858 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC6.46□□□□□ -1.38
Rps28P62858 Gm38258-201ENSMUST00000191792 675 ntTSL 3 BASIC6.46□□□□□ -1.38
Rps28P62858 Nr5a2-203ENSMUST00000192357 1859 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Rps28P62858 Gm37259-201ENSMUST00000193903 849 ntBASIC6.46□□□□□ -1.38
Rps28P62858 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC6.46□□□□□ -1.38
Rps28P62858 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 AC158355.1-201ENSMUST00000215895 1705 ntBASIC6.46□□□□□ -1.38
Rps28P62858 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC6.46□□□□□ -1.38
Rps28P62858 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Tgm5-201ENSMUST00000028721 2613 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC6.46□□□□□ -1.38
Rps28P62858 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Rps28P62858 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
Rps28P62858 Zfp408-202ENSMUST00000111333 3740 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Sncaip-203ENSMUST00000163742 3272 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
Rps28P62858 Pygl-202ENSMUST00000161083 2992 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Ccdc80-201ENSMUST00000061050 3648 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Gm15990-201ENSMUST00000132223 3321 ntTSL 5 BASIC6.46□□□□□ -1.38
Rps28P62858 Vwa3b-203ENSMUST00000117172 1636 ntAPPRIS P5 TSL 2 BASIC6.46□□□□□ -1.38
Rps28P62858 Rbbp4-201ENSMUST00000102598 4407 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Slamf9-201ENSMUST00000027830 1313 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Gm42847-201ENSMUST00000201732 2553 ntBASIC6.46□□□□□ -1.38
Rps28P62858 Mrpl47-201ENSMUST00000043966 3364 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Kcnj10-201ENSMUST00000056136 5407 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Rps28P62858 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms