Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prox1P48437 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prox1P48437 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Prox1P48437 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Prox1P48437 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prox1P48437 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Prox1P48437 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Prox1P48437 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.95□□□□□ -0.66
Prox1P48437 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Prox1P48437 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.95□□□□□ -0.66
Prox1P48437 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Prox1P48437 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prox1P48437 Gm7584-201ENSMUST00000175829 940 ntBASIC10.95□□□□□ -0.66
Prox1P48437 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.95□□□□□ -0.66
Prox1P48437 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.95□□□□□ -0.66
Prox1P48437 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.95□□□□□ -0.66
Prox1P48437 Gm38341-201ENSMUST00000195357 515 ntBASIC10.95□□□□□ -0.66
Prox1P48437 Gm43758-201ENSMUST00000199500 367 ntBASIC10.95□□□□□ -0.66
Prox1P48437 Gm19287-201ENSMUST00000203190 358 ntBASIC10.95□□□□□ -0.66
Prox1P48437 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.95□□□□□ -0.66
Prox1P48437 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Prox1P48437 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Prox1P48437 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prox1P48437 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prox1P48437 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Prox1P48437 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.95□□□□□ -0.66
Prox1P48437 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prox1P48437 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Prox1P48437 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prox1P48437 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.95□□□□□ -0.66
Prox1P48437 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prox1P48437 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Prox1P48437 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Prox1P48437 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.95□□□□□ -0.66
Prox1P48437 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Prox1P48437 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prox1P48437 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Prox1P48437 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.95□□□□□ -0.66
Prox1P48437 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Prox1P48437 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Prox1P48437 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.94□□□□□ -0.66
Prox1P48437 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Prox1P48437 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Prox1P48437 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Prox1P48437 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 Gm15236-201ENSMUST00000117309 379 ntBASIC10.94□□□□□ -0.66
Prox1P48437 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 Gm13297-201ENSMUST00000120205 934 ntBASIC10.94□□□□□ -0.66
Prox1P48437 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.94□□□□□ -0.66
Prox1P48437 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.94□□□□□ -0.66
Prox1P48437 Gm3096-201ENSMUST00000185770 364 ntBASIC10.94□□□□□ -0.66
Prox1P48437 Gm4857-201ENSMUST00000192718 785 ntBASIC10.94□□□□□ -0.66
Prox1P48437 Gm8712-201ENSMUST00000221090 701 ntBASIC10.94□□□□□ -0.66
Prox1P48437 Lect2-202ENSMUST00000225183 823 ntBASIC10.94□□□□□ -0.66
Prox1P48437 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.94□□□□□ -0.66
Prox1P48437 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.94□□□□□ -0.66
Prox1P48437 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Prox1P48437 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.94□□□□□ -0.66
Prox1P48437 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC10.94□□□□□ -0.66
Prox1P48437 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Prox1P48437 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Prox1P48437 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.94□□□□□ -0.66
Prox1P48437 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Prox1P48437 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prox1P48437 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prox1P48437 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prox1P48437 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prox1P48437 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prox1P48437 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prox1P48437 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.93□□□□□ -0.66
Prox1P48437 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Prox1P48437 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prox1P48437 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Prox1P48437 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Prox1P48437 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.93□□□□□ -0.66
Prox1P48437 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms