Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Slc6a1P31648 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Slc6a1P31648 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Slc6a1P31648 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC9.82□□□□□ -0.84
Slc6a1P31648 Gm6621-201ENSMUST00000193251 772 ntBASIC9.82□□□□□ -0.84
Slc6a1P31648 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.82□□□□□ -0.84
Slc6a1P31648 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC9.82□□□□□ -0.84
Slc6a1P31648 AC125209.1-201ENSMUST00000225812 766 ntBASIC9.82□□□□□ -0.84
Slc6a1P31648 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Slc6a1P31648 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Slc6a1P31648 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Slc6a1P31648 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Slc6a1P31648 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Slc6a1P31648 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.81□□□□□ -0.84
Slc6a1P31648 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Slc6a1P31648 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Slc6a1P31648 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 Gm24255-201ENSMUST00000104481 128 ntBASIC9.81□□□□□ -0.84
Slc6a1P31648 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC9.81□□□□□ -0.84
Slc6a1P31648 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC9.81□□□□□ -0.84
Slc6a1P31648 Gm7584-201ENSMUST00000175829 940 ntBASIC9.81□□□□□ -0.84
Slc6a1P31648 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Slc6a1P31648 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC9.81□□□□□ -0.84
Slc6a1P31648 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC9.81□□□□□ -0.84
Slc6a1P31648 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 Gm9004-201ENSMUST00000218739 1222 ntBASIC9.81□□□□□ -0.84
Slc6a1P31648 CT025533.2-201ENSMUST00000228715 1248 ntBASIC9.81□□□□□ -0.84
Slc6a1P31648 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.81□□□□□ -0.84
Slc6a1P31648 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC9.81□□□□□ -0.84
Slc6a1P31648 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC9.81□□□□□ -0.84
Slc6a1P31648 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Slc6a1P31648 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Slc6a1P31648 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Slc6a1P31648 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Slc6a1P31648 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Slc6a1P31648 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Slc6a1P31648 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Slc6a1P31648 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Slc6a1P31648 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Slc6a1P31648 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Slc6a1P31648 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Slc6a1P31648 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Slc6a1P31648 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Slc6a1P31648 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC9.8□□□□□ -0.84
Slc6a1P31648 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
Slc6a1P31648 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Slc6a1P31648 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Slc6a1P31648 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC9.8□□□□□ -0.84
Slc6a1P31648 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC9.8□□□□□ -0.84
Slc6a1P31648 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Slc6a1P31648 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Slc6a1P31648 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Slc6a1P31648 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Slc6a1P31648 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC9.8□□□□□ -0.84
Slc6a1P31648 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC9.8□□□□□ -0.84
Slc6a1P31648 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC9.8□□□□□ -0.84
Slc6a1P31648 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms