Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC20.53■□□□□ 0.88
Ccdc180J3QNE4 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc180J3QNE4 Adgrv1-214ENSMUST00000224088 1492 ntBASIC20.53■□□□□ 0.88
Ccdc180J3QNE4 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc180J3QNE4 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc180J3QNE4 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc180J3QNE4 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc180J3QNE4 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc180J3QNE4 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc180J3QNE4 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Ccdc180J3QNE4 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc180J3QNE4 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc180J3QNE4 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc180J3QNE4 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc180J3QNE4 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc180J3QNE4 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc180J3QNE4 Gm13827-201ENSMUST00000148801 372 ntBASIC20.52■□□□□ 0.88
Ccdc180J3QNE4 Ighv1-2-201ENSMUST00000195325 378 ntBASIC20.52■□□□□ 0.88
Ccdc180J3QNE4 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC20.52■□□□□ 0.88
Ccdc180J3QNE4 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC20.52■□□□□ 0.88
Ccdc180J3QNE4 Nsmce2-203ENSMUST00000227173 1122 ntBASIC20.52■□□□□ 0.88
Ccdc180J3QNE4 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Ccdc180J3QNE4 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc180J3QNE4 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc180J3QNE4 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc180J3QNE4 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc180J3QNE4 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc180J3QNE4 Gm43051-201ENSMUST00000201096 2678 ntBASIC20.52■□□□□ 0.87
Ccdc180J3QNE4 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Ccdc180J3QNE4 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ccdc180J3QNE4 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 Gm11380-201ENSMUST00000118067 560 ntBASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 AC160410.1-201ENSMUST00000219298 1972 ntBASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc180J3QNE4 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc180J3QNE4 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc180J3QNE4 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc180J3QNE4 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Ccdc180J3QNE4 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc180J3QNE4 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc180J3QNE4 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc180J3QNE4 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc180J3QNE4 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Ccdc180J3QNE4 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Ccdc180J3QNE4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc180J3QNE4 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC20.5■□□□□ 0.87
Ccdc180J3QNE4 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc180J3QNE4 Gm8019-201ENSMUST00000119317 587 ntBASIC20.5■□□□□ 0.87
Ccdc180J3QNE4 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc180J3QNE4 Gm9574-201ENSMUST00000173127 845 ntBASIC20.5■□□□□ 0.87
Ccdc180J3QNE4 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC20.5■□□□□ 0.87
Ccdc180J3QNE4 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC20.5■□□□□ 0.87
Ccdc180J3QNE4 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC20.5■□□□□ 0.87
Ccdc180J3QNE4 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc180J3QNE4 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc180J3QNE4 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC20.5■□□□□ 0.87
Ccdc180J3QNE4 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc180J3QNE4 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc180J3QNE4 AC167022.1-201ENSMUST00000218647 1458 ntBASIC20.5■□□□□ 0.87
Ccdc180J3QNE4 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc180J3QNE4 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc180J3QNE4 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc180J3QNE4 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC20.49■□□□□ 0.87
Ccdc180J3QNE4 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc180J3QNE4 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc180J3QNE4 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc180J3QNE4 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Ccdc180J3QNE4 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc180J3QNE4 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC20.49■□□□□ 0.87
Ccdc180J3QNE4 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Ccdc180J3QNE4 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc180J3QNE4 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc180J3QNE4 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc180J3QNE4 Gm9625-201ENSMUST00000180422 955 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms