Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm38349-201ENSMUST00000195732 462 ntBASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Gm20568-201ENSMUST00000197129 208 ntBASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Gm43866-201ENSMUST00000203894 839 ntBASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Gm43997-201ENSMUST00000203986 1005 ntBASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 AC133517.1-201ENSMUST00000225825 594 ntBASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 AC101205.2-201ENSMUST00000226206 715 ntBASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 AC154517.2-201ENSMUST00000220829 2458 ntBASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Gm42943-201ENSMUST00000199676 3242 ntBASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Gm13608-201ENSMUST00000121807 1406 ntBASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hfm1D3Z4R1 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Gm11919-201ENSMUST00000117609 721 ntBASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Gm15258-201ENSMUST00000153801 741 ntBASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Gm38233-201ENSMUST00000194259 807 ntBASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Gm5738-201ENSMUST00000206016 779 ntBASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Gm8170-201ENSMUST00000218581 945 ntBASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Gm5040-201ENSMUST00000218609 800 ntBASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 AC125409.3-201ENSMUST00000223488 653 ntBASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hfm1D3Z4R1 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 Gm13624-201ENSMUST00000120263 462 ntBASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 Gm4705-201ENSMUST00000177415 354 ntBASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 Gm6216-201ENSMUST00000182390 687 ntBASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 Gm38007-201ENSMUST00000192187 313 ntBASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 Gm43106-201ENSMUST00000199485 637 ntBASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 Gm25514-201ENSMUST00000083860 135 ntBASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 Gm42480-201ENSMUST00000198434 2595 ntBASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 Gm43972-201ENSMUST00000181398 1467 ntBASIC15.77■□□□□ 0.12
Hfm1D3Z4R1 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Hfm1D3Z4R1 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hfm1D3Z4R1 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hfm1D3Z4R1 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hfm1D3Z4R1 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Hfm1D3Z4R1 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hfm1D3Z4R1 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC15.77■□□□□ 0.11
Hfm1D3Z4R1 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms