Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Clasp1-220ENSMUST00000191445 4914 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Sele-201ENSMUST00000027874 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Parva-201ENSMUST00000033030 4454 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Rbmx-201ENSMUST00000098470 3107 ntTSL 5 BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Wdr78-202ENSMUST00000036557 3479 ntTSL 5 BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm14921-201ENSMUST00000118643 908 ntBASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm12017-201ENSMUST00000122453 1003 ntBASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm7230-201ENSMUST00000173026 815 ntBASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm10766-202ENSMUST00000194123 606 ntBASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm18905-201ENSMUST00000205454 928 ntBASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm32111-201ENSMUST00000207689 846 ntBASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Spcs1-207ENSMUST00000228767 1008 ntBASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm24447-201ENSMUST00000083977 338 ntBASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Olfr338-203ENSMUST00000217511 5724 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Utp6-201ENSMUST00000043152 3877 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Nfam1-202ENSMUST00000100377 2881 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Sez6l2-202ENSMUST00000106333 3595 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Uox-201ENSMUST00000029837 2737 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Arpp19-209ENSMUST00000169492 3963 ntTSL 2 BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm11873-201ENSMUST00000117877 1304 ntBASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Nrep-201ENSMUST00000051087 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Olfr126-203ENSMUST00000217487 1859 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm43447-201ENSMUST00000198471 1535 ntBASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Dock1-201ENSMUST00000084488 6807 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Gm3880A0A1B0GSB3 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Plagl2-202ENSMUST00000109795 5571 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm15496-201ENSMUST00000129578 2456 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Cldn12-207ENSMUST00000179804 3752 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Arfgef2-201ENSMUST00000099078 8770 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 5830473C10Rik-201ENSMUST00000094615 2308 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Hmgcs2-201ENSMUST00000090746 3290 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Dusp3-201ENSMUST00000003612 4212 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Vmn2r-ps97-201ENSMUST00000222427 1970 ntBASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Ndn-201ENSMUST00000038775 3694 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Ftsj3-201ENSMUST00000021048 3144 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Ccnd1-201ENSMUST00000093962 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm43823-201ENSMUST00000197391 1808 ntBASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Ccdc171-201ENSMUST00000053414 4525 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Slc36a2-201ENSMUST00000039305 2429 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Pigq-202ENSMUST00000097368 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Gm26668-201ENSMUST00000181125 3635 ntTSL 5 BASIC5.42□□□□□ -1.54
Gm3880A0A1B0GSB3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms