Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
RpgrQ9R0X5 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
RpgrQ9R0X5 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.64□□□□□ -0.55
RpgrQ9R0X5 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Gm5363-201ENSMUST00000211927 938 ntBASIC11.64□□□□□ -0.55
RpgrQ9R0X5 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RpgrQ9R0X5 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Gm29199-201ENSMUST00000187766 775 ntBASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.63□□□□□ -0.55
RpgrQ9R0X5 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
RpgrQ9R0X5 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.63□□□□□ -0.55
RpgrQ9R0X5 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms