Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Gm25261-201ENSMUST00000157416 134 ntBASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Gm24548-201ENSMUST00000158650 108 ntBASIC10.94□□□□□ -0.66
Ube4bQ9ES00 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Gm6222-202ENSMUST00000182143 629 ntBASIC10.94□□□□□ -0.66
Ube4bQ9ES00 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ube4bQ9ES00 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 Gm13315-201ENSMUST00000120376 991 ntBASIC10.93□□□□□ -0.66
Ube4bQ9ES00 Gm14441-201ENSMUST00000121960 540 ntBASIC10.93□□□□□ -0.66
Ube4bQ9ES00 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.93□□□□□ -0.66
Ube4bQ9ES00 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ube4bQ9ES00 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Gm12314-201ENSMUST00000118104 538 ntBASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.92□□□□□ -0.66
Ube4bQ9ES00 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Gm17931-201ENSMUST00000208132 634 ntBASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ube4bQ9ES00 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms