Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nkx6-1Q99MA9 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Gm11942-201ENSMUST00000180255 345 ntBASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Gm43854-201ENSMUST00000200418 394 ntBASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 CT010431.1-201ENSMUST00000221249 1080 ntBASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.79□□□□□ -0.68
Nkx6-1Q99MA9 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Gm6170-201ENSMUST00000187672 1388 ntBASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Gm13183-201ENSMUST00000118615 789 ntBASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Gm12337-201ENSMUST00000119634 400 ntBASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Gm23694-201ENSMUST00000179335 110 ntBASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Gm6114-201ENSMUST00000182472 968 ntBASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 AC162932.1-201ENSMUST00000219209 872 ntBASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 CT030166.5-201ENSMUST00000222249 420 ntBASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx6-1Q99MA9 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Nkx6-1Q99MA9 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Nkx6-1Q99MA9 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.77□□□□□ -0.68
Nkx6-1Q99MA9 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.77□□□□□ -0.68
Nkx6-1Q99MA9 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nkx6-1Q99MA9 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Smok4a-201ENSMUST00000074512 1455 ntBASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Gm25562-201ENSMUST00000104608 133 ntBASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Gm4294-201ENSMUST00000105169 614 ntBASIC10.77□□□□□ -0.69
Nkx6-1Q99MA9 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms