Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Chmp1b1Q99LU0 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Btrc-209ENSMUST00000224478 2194 ntBASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chmp1b1Q99LU0 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Gm12501-201ENSMUST00000119163 529 ntBASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Gm11960-201ENSMUST00000122068 925 ntBASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Gm25881-201ENSMUST00000157783 103 ntBASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Gm28937-201ENSMUST00000185413 695 ntBASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Gm29400-201ENSMUST00000187208 695 ntBASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Gm28662-201ENSMUST00000188446 695 ntBASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Gm28251-201ENSMUST00000188835 695 ntBASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Gm3332-201ENSMUST00000189337 928 ntBASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Gm37318-201ENSMUST00000194325 695 ntBASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Gm38017-201ENSMUST00000194768 695 ntBASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Gm37287-201ENSMUST00000195449 695 ntBASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Gm37793-201ENSMUST00000195548 695 ntBASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Erich3-203ENSMUST00000189969 3460 ntBASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Chmp1b1Q99LU0 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Chmp1b1Q99LU0 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms