Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp7Q8R1T1 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chmp7Q8R1T1 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chmp7Q8R1T1 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chmp7Q8R1T1 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chmp7Q8R1T1 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chmp7Q8R1T1 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chmp7Q8R1T1 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 Gm11578-201ENSMUST00000118530 459 ntBASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 Gm5700-201ENSMUST00000191483 989 ntBASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 Id2-203ENSMUST00000222667 958 ntBASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 Gm44106-201ENSMUST00000203153 1599 ntBASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 Gm3836-201ENSMUST00000211377 1613 ntBASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 Gm43760-201ENSMUST00000202120 3015 ntBASIC14.58□□□□□ -0.08
Chmp7Q8R1T1 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Gm12389-201ENSMUST00000117696 418 ntBASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Gm15036-201ENSMUST00000118880 400 ntBASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Gm14234-201ENSMUST00000119539 845 ntBASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Gm17221-201ENSMUST00000163909 481 ntBASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Gm17073-201ENSMUST00000168069 556 ntBASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Gm17070-201ENSMUST00000170463 784 ntBASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Gm19246-201ENSMUST00000173599 255 ntBASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Lect2-202ENSMUST00000225183 823 ntBASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Chmp7Q8R1T1 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Gm25343-201ENSMUST00000157460 107 ntBASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms