Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.89□□□□□ -0.67
CroccQ8CJ40 Gm4726-201ENSMUST00000135604 736 ntBASIC10.89□□□□□ -0.67
CroccQ8CJ40 Gm6019-201ENSMUST00000148369 736 ntBASIC10.89□□□□□ -0.67
CroccQ8CJ40 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.89□□□□□ -0.67
CroccQ8CJ40 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.89□□□□□ -0.67
CroccQ8CJ40 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Gm44980-201ENSMUST00000205826 314 ntBASIC10.89□□□□□ -0.67
CroccQ8CJ40 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.89□□□□□ -0.67
CroccQ8CJ40 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.89□□□□□ -0.67
CroccQ8CJ40 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.89□□□□□ -0.67
CroccQ8CJ40 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Gm14395-201ENSMUST00000120494 563 ntBASIC10.89□□□□□ -0.67
CroccQ8CJ40 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC10.89□□□□□ -0.67
CroccQ8CJ40 B9d1os-201ENSMUST00000137010 674 ntBASIC10.89□□□□□ -0.67
CroccQ8CJ40 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.89□□□□□ -0.67
CroccQ8CJ40 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CroccQ8CJ40 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CroccQ8CJ40 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CroccQ8CJ40 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
CroccQ8CJ40 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CroccQ8CJ40 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CroccQ8CJ40 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
CroccQ8CJ40 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
CroccQ8CJ40 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CroccQ8CJ40 Gm12463-201ENSMUST00000118271 849 ntBASIC10.88□□□□□ -0.67
CroccQ8CJ40 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.88□□□□□ -0.67
CroccQ8CJ40 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.88□□□□□ -0.67
CroccQ8CJ40 Gm21092-201ENSMUST00000178995 955 ntBASIC10.88□□□□□ -0.67
CroccQ8CJ40 Gm37466-201ENSMUST00000195692 652 ntBASIC10.88□□□□□ -0.67
CroccQ8CJ40 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.88□□□□□ -0.67
CroccQ8CJ40 Gm7207-201ENSMUST00000211575 1067 ntBASIC10.88□□□□□ -0.67
CroccQ8CJ40 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CroccQ8CJ40 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CroccQ8CJ40 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CroccQ8CJ40 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CroccQ8CJ40 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CroccQ8CJ40 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
CroccQ8CJ40 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CroccQ8CJ40 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CroccQ8CJ40 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
CroccQ8CJ40 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
CroccQ8CJ40 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CroccQ8CJ40 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
CroccQ8CJ40 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.87□□□□□ -0.67
CroccQ8CJ40 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.87□□□□□ -0.67
CroccQ8CJ40 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Gm23694-201ENSMUST00000179335 110 ntBASIC10.87□□□□□ -0.67
CroccQ8CJ40 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.87□□□□□ -0.67
CroccQ8CJ40 AC129219.2-201ENSMUST00000224324 701 ntBASIC10.87□□□□□ -0.67
CroccQ8CJ40 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CroccQ8CJ40 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms