Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trim9Q8C7M3 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Gm23699-201ENSMUST00000158835 135 ntBASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Spcs1-203ENSMUST00000226374 592 ntBASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim9Q8C7M3 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Gm21778-201ENSMUST00000178779 471 ntBASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Gm43852-201ENSMUST00000202098 917 ntBASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim9Q8C7M3 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms