Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Gm23949-201ENSMUST00000104027 127 ntBASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Gm11509-201ENSMUST00000117358 325 ntBASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Gm28937-201ENSMUST00000185413 695 ntBASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Gm29400-201ENSMUST00000187208 695 ntBASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Gm28662-201ENSMUST00000188446 695 ntBASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Gm28251-201ENSMUST00000188835 695 ntBASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Gm37318-201ENSMUST00000194325 695 ntBASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Gm38017-201ENSMUST00000194768 695 ntBASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Gm37287-201ENSMUST00000195449 695 ntBASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Gm37793-201ENSMUST00000195548 695 ntBASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc40Q8BI79 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Gm4310-201ENSMUST00000177847 889 ntBASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 AC154352.1-201ENSMUST00000221477 2365 ntBASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc40Q8BI79 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms