Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Rai1Q61818 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Rai1Q61818 Gm12461-201ENSMUST00000120231 1239 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rai1Q61818 Gm23647-201ENSMUST00000175042 109 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 Rn5s-201ENSMUST00000177555 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s108-201ENSMUST00000177575 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s121-201ENSMUST00000177589 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s146-201ENSMUST00000177889 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 Gm22109-201ENSMUST00000177995 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 Gm22291-201ENSMUST00000178027 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s141-201ENSMUST00000178066 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 Gm23284-201ENSMUST00000178069 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s100-201ENSMUST00000178106 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s111-201ENSMUST00000178203 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s105-201ENSMUST00000178499 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s149-201ENSMUST00000178520 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s103-201ENSMUST00000178755 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s123-201ENSMUST00000178804 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s142-201ENSMUST00000178820 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s144-201ENSMUST00000178859 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s139-201ENSMUST00000178975 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s134-201ENSMUST00000178983 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s136-201ENSMUST00000179080 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 Gm25018-201ENSMUST00000179081 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s104-201ENSMUST00000179107 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s113-201ENSMUST00000179143 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s133-201ENSMUST00000179275 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s117-201ENSMUST00000179431 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 Gm25212-201ENSMUST00000179432 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s138-201ENSMUST00000179476 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s122-201ENSMUST00000179500 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s143-201ENSMUST00000179542 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s107-201ENSMUST00000179704 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 Gm26391-201ENSMUST00000179843 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s110-201ENSMUST00000179995 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s128-201ENSMUST00000180096 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 n-R5s124-201ENSMUST00000180334 119 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 Gm7255-201ENSMUST00000187371 908 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 Gm8384-201ENSMUST00000190905 704 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 Gm37723-201ENSMUST00000194480 565 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 Gm7192-201ENSMUST00000210793 1137 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC10.91□□□□□ -0.66
Rai1Q61818 AC169511.1-201ENSMUST00000227639 995 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Rai1Q61818 Gm24089-201ENSMUST00000093696 109 ntBASIC10.91□□□□□ -0.66
Rai1Q61818 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Rai1Q61818 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Rai1Q61818 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rai1Q61818 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Rai1Q61818 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rai1Q61818 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rai1Q61818 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rai1Q61818 Erich3-203ENSMUST00000189969 3460 ntBASIC10.9□□□□□ -0.66
Rai1Q61818 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rai1Q61818 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rai1Q61818 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rai1Q61818 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rai1Q61818 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rai1Q61818 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rai1Q61818 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rai1Q61818 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rai1Q61818 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC10.9□□□□□ -0.66
Rai1Q61818 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC10.9□□□□□ -0.66
Rai1Q61818 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rai1Q61818 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC10.9□□□□□ -0.66
Rai1Q61818 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC10.9□□□□□ -0.66
Rai1Q61818 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC10.9□□□□□ -0.66
Rai1Q61818 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC10.9□□□□□ -0.66
Rai1Q61818 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Rai1Q61818 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC10.9□□□□□ -0.66
Rai1Q61818 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rai1Q61818 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC10.9□□□□□ -0.66
Rai1Q61818 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rai1Q61818 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rai1Q61818 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Rai1Q61818 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Rai1Q61818 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Rai1Q61818 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Rai1Q61818 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Rai1Q61818 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.9□□□□□ -0.66
Rai1Q61818 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rai1Q61818 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Rai1Q61818 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
Rai1Q61818 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.9□□□□□ -0.67
Rai1Q61818 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rai1Q61818 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rai1Q61818 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms