Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm42706-201ENSMUST00000199733 1910 ntBASIC14.79□□□□□ -0.04
Sf3b2Q3UJB0 AC134913.2-201ENSMUST00000225017 771 ntBASIC14.79□□□□□ -0.04
Sf3b2Q3UJB0 AC129217.1-201ENSMUST00000225181 642 ntBASIC14.79□□□□□ -0.04
Sf3b2Q3UJB0 Matn2-206ENSMUST00000228570 2798 ntBASIC14.79□□□□□ -0.04
Sf3b2Q3UJB0 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b2Q3UJB0 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b2Q3UJB0 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b2Q3UJB0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Sf3b2Q3UJB0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b2Q3UJB0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Gm25148-201ENSMUST00000104611 123 ntBASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Gm3828-201ENSMUST00000121817 257 ntBASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Gm5254-201ENSMUST00000188353 977 ntBASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 AC122024.3-201ENSMUST00000217719 294 ntBASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 AC118639.1-202ENSMUST00000226957 653 ntBASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Nsmce2-203ENSMUST00000227173 1122 ntBASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sf3b2Q3UJB0 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Sf3b2Q3UJB0 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3b2Q3UJB0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3b2Q3UJB0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3b2Q3UJB0 Gm7701-201ENSMUST00000163185 1479 ntBASIC14.77□□□□□ -0.04
Sf3b2Q3UJB0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Sf3b2Q3UJB0 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3b2Q3UJB0 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3b2Q3UJB0 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3b2Q3UJB0 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3b2Q3UJB0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3b2Q3UJB0 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sf3b2Q3UJB0 Gm11960-201ENSMUST00000122068 925 ntBASIC14.77□□□□□ -0.05
Sf3b2Q3UJB0 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC14.77□□□□□ -0.05
Sf3b2Q3UJB0 Gm7805-201ENSMUST00000154348 448 ntBASIC14.77□□□□□ -0.05
Sf3b2Q3UJB0 Gm27826-201ENSMUST00000175282 255 ntBASIC14.77□□□□□ -0.05
Sf3b2Q3UJB0 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC14.77□□□□□ -0.05
Sf3b2Q3UJB0 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC14.77□□□□□ -0.05
Sf3b2Q3UJB0 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.05
Sf3b2Q3UJB0 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC14.77□□□□□ -0.05
Sf3b2Q3UJB0 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sf3b2Q3UJB0 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.77□□□□□ -0.05
Sf3b2Q3UJB0 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sf3b2Q3UJB0 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sf3b2Q3UJB0 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sf3b2Q3UJB0 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sf3b2Q3UJB0 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sf3b2Q3UJB0 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 Mir1249-201ENSMUST00000116791 98 ntBASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 Gm13426-201ENSMUST00000117887 795 ntBASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 Gm11736-201ENSMUST00000121468 505 ntBASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 Gm24140-201ENSMUST00000122773 326 ntBASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 Gm38233-201ENSMUST00000194259 807 ntBASIC14.76□□□□□ -0.05
Sf3b2Q3UJB0 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms