Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Gm4398-201ENSMUST00000182698 992 ntBASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Gm18349-201ENSMUST00000187440 904 ntBASIC5.81□□□□□ -1.48
Ush2AQ2QI47 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Cox7a1-202ENSMUST00000208441 485 ntTSL 2 BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 AC152946.3-201ENSMUST00000219424 280 ntBASIC5.81□□□□□ -1.48
Ush2AQ2QI47 AC154643.1-201ENSMUST00000225643 625 ntBASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Gm8522-201ENSMUST00000118416 1929 ntBASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Tead4-203ENSMUST00000130454 1718 ntTSL 5 BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Snord17-201ENSMUST00000104526 238 ntBASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Gm8391-201ENSMUST00000185632 726 ntBASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Gm26930-201ENSMUST00000194874 1244 ntBASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Gm45566-201ENSMUST00000209883 1168 ntBASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 AC123533.3-201ENSMUST00000228056 454 ntBASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Rgs9-204ENSMUST00000106706 2313 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Gm46339-201ENSMUST00000222720 3539 ntBASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Bcl2-202ENSMUST00000189999 2841 ntBASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Gm5697-201ENSMUST00000122295 2482 ntBASIC5.81□□□□□ -1.48
Ush2AQ2QI47 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Anp32e-207ENSMUST00000170125 413 ntTSL 3 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Gm5575-201ENSMUST00000190879 398 ntBASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Fam162b-201ENSMUST00000020064 646 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Gm18122-201ENSMUST00000211390 904 ntBASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Rpl21-ps2-201ENSMUST00000222933 481 ntBASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Olfr304-201ENSMUST00000077210 1002 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Mir25-201ENSMUST00000083460 84 ntBASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Gm20633-201ENSMUST00000176742 2831 ntBASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 AC154862.1-201ENSMUST00000225060 1763 ntBASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Gm11514-201ENSMUST00000117670 432 ntBASIC5.8□□□□□ -1.48
Ush2AQ2QI47 4933431E20Rik-205ENSMUST00000137970 795 ntTSL 3 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Gm13629-201ENSMUST00000141149 1022 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Cnih3-203ENSMUST00000162685 602 ntTSL 5 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Rcan2-203ENSMUST00000177857 984 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Gm7678-201ENSMUST00000181879 943 ntBASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 1700041I07Rik-201ENSMUST00000197536 435 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 AC113178.1-201ENSMUST00000227616 935 ntBASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Ctsw-201ENSMUST00000025844 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 1700063H04Rik-201ENSMUST00000043553 817 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Klk11-201ENSMUST00000080211 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 AC134898.1-201ENSMUST00000223738 1836 ntBASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Pla2g2d-201ENSMUST00000030528 2167 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Ush2AQ2QI47 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms