Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43cP86449 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.42□□□□□ -0.42
Trim43cP86449 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim43cP86449 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim43cP86449 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim43cP86449 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim43cP86449 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim43cP86449 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.42□□□□□ -0.42
Trim43cP86449 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Gm14395-201ENSMUST00000120494 563 ntBASIC12.42□□□□□ -0.42
Trim43cP86449 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.42□□□□□ -0.42
Trim43cP86449 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim43cP86449 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC12.42□□□□□ -0.42
Trim43cP86449 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.42□□□□□ -0.42
Trim43cP86449 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.42□□□□□ -0.42
Trim43cP86449 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim43cP86449 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.42□□□□□ -0.42
Trim43cP86449 Gm4654-201ENSMUST00000183305 982 ntBASIC12.42□□□□□ -0.42
Trim43cP86449 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim43cP86449 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim43cP86449 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim43cP86449 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.42□□□□□ -0.42
Trim43cP86449 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.42□□□□□ -0.42
Trim43cP86449 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim43cP86449 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim43cP86449 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim43cP86449 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43cP86449 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43cP86449 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.41□□□□□ -0.42
Trim43cP86449 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43cP86449 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43cP86449 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43cP86449 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43cP86449 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43cP86449 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trim43cP86449 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43cP86449 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim43cP86449 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43cP86449 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43cP86449 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trim43cP86449 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43cP86449 Gm11949-201ENSMUST00000117640 372 ntBASIC12.41□□□□□ -0.42
Trim43cP86449 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.41□□□□□ -0.42
Trim43cP86449 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43cP86449 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.41□□□□□ -0.42
Trim43cP86449 Gm21092-201ENSMUST00000178995 955 ntBASIC12.41□□□□□ -0.42
Trim43cP86449 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43cP86449 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43cP86449 Gm9353-201ENSMUST00000200472 604 ntBASIC12.41□□□□□ -0.42
Trim43cP86449 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.41□□□□□ -0.42
Trim43cP86449 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Trim43cP86449 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.41□□□□□ -0.42
Trim43cP86449 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.41□□□□□ -0.42
Trim43cP86449 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.41□□□□□ -0.42
Trim43cP86449 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.41□□□□□ -0.42
Trim43cP86449 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43cP86449 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.41□□□□□ -0.42
Trim43cP86449 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.41□□□□□ -0.42
Trim43cP86449 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.41□□□□□ -0.42
Trim43cP86449 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.41□□□□□ -0.42
Trim43cP86449 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.41□□□□□ -0.42
Trim43cP86449 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43cP86449 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.41□□□□□ -0.42
Trim43cP86449 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43cP86449 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.41□□□□□ -0.42
Trim43cP86449 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.41□□□□□ -0.42
Trim43cP86449 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43cP86449 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43cP86449 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43cP86449 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43cP86449 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43cP86449 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms