Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Pdlim4P70271 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Pdlim4P70271 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Pdlim4P70271 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Pdlim4P70271 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Pdlim4P70271 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Pdlim4P70271 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC9.55□□□□□ -0.88
Pdlim4P70271 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Pdlim4P70271 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Pdlim4P70271 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.55□□□□□ -0.88
Pdlim4P70271 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Pdlim4P70271 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Pdlim4P70271 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Pdlim4P70271 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC9.55□□□□□ -0.88
Pdlim4P70271 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Pdlim4P70271 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Pdlim4P70271 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Pdlim4P70271 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Pdlim4P70271 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Pdlim4P70271 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Pdlim4P70271 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Pdlim4P70271 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Pdlim4P70271 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Pdlim4P70271 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Pdlim4P70271 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Pdlim4P70271 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC9.54□□□□□ -0.88
Pdlim4P70271 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC9.54□□□□□ -0.88
Pdlim4P70271 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Pdlim4P70271 Mir680-2-201ENSMUST00000102163 110 ntBASIC9.54□□□□□ -0.88
Pdlim4P70271 Gm23251-201ENSMUST00000103773 110 ntBASIC9.54□□□□□ -0.88
Pdlim4P70271 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Pdlim4P70271 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 Gm9062-201ENSMUST00000117712 727 ntBASIC9.54□□□□□ -0.88
Pdlim4P70271 Gm15566-201ENSMUST00000121130 590 ntBASIC9.54□□□□□ -0.88
Pdlim4P70271 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC9.54□□□□□ -0.88
Pdlim4P70271 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC9.54□□□□□ -0.88
Pdlim4P70271 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC9.54□□□□□ -0.88
Pdlim4P70271 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 Rn7s1-201ENSMUST00000174924 300 ntBASIC9.54□□□□□ -0.88
Pdlim4P70271 Rn7s2-201ENSMUST00000175032 300 ntBASIC9.54□□□□□ -0.88
Pdlim4P70271 Gm26461-201ENSMUST00000175064 290 ntBASIC9.54□□□□□ -0.88
Pdlim4P70271 Mir5132-201ENSMUST00000175166 71 ntBASIC9.54□□□□□ -0.88
Pdlim4P70271 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
Pdlim4P70271 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC9.54□□□□□ -0.88
Pdlim4P70271 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC9.54□□□□□ -0.88
Pdlim4P70271 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC9.54□□□□□ -0.88
Pdlim4P70271 Gm43138-201ENSMUST00000199123 708 ntBASIC9.54□□□□□ -0.88
Pdlim4P70271 Gm45113-201ENSMUST00000207518 165 ntBASIC9.54□□□□□ -0.88
Pdlim4P70271 Abhd11os-203ENSMUST00000222613 363 ntBASIC9.54□□□□□ -0.88
Pdlim4P70271 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
Pdlim4P70271 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC9.54□□□□□ -0.88
Pdlim4P70271 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Pdlim4P70271 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC9.53□□□□□ -0.88
Pdlim4P70271 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Pdlim4P70271 Gm43760-201ENSMUST00000202120 3015 ntBASIC9.53□□□□□ -0.88
Pdlim4P70271 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 Gm42913-201ENSMUST00000197936 1853 ntBASIC9.53□□□□□ -0.88
Pdlim4P70271 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC9.53□□□□□ -0.88
Pdlim4P70271 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC9.53□□□□□ -0.88
Pdlim4P70271 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC9.53□□□□□ -0.88
Pdlim4P70271 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms