Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.16□□□□□ -0.78
Sf3b6P59708 Gm28937-201ENSMUST00000185413 695 ntBASIC10.16□□□□□ -0.78
Sf3b6P59708 Gm29400-201ENSMUST00000187208 695 ntBASIC10.16□□□□□ -0.78
Sf3b6P59708 Gm9230-201ENSMUST00000188228 532 ntBASIC10.16□□□□□ -0.78
Sf3b6P59708 Gm28662-201ENSMUST00000188446 695 ntBASIC10.16□□□□□ -0.78
Sf3b6P59708 Gm28251-201ENSMUST00000188835 695 ntBASIC10.16□□□□□ -0.78
Sf3b6P59708 Gm37318-201ENSMUST00000194325 695 ntBASIC10.16□□□□□ -0.78
Sf3b6P59708 Gm38017-201ENSMUST00000194768 695 ntBASIC10.16□□□□□ -0.78
Sf3b6P59708 Gm37287-201ENSMUST00000195449 695 ntBASIC10.16□□□□□ -0.78
Sf3b6P59708 Gm37793-201ENSMUST00000195548 695 ntBASIC10.16□□□□□ -0.78
Sf3b6P59708 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Sf3b6P59708 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.16□□□□□ -0.78
Sf3b6P59708 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.16□□□□□ -0.78
Sf3b6P59708 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.16□□□□□ -0.78
Sf3b6P59708 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Sf3b6P59708 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.16□□□□□ -0.78
Sf3b6P59708 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Sf3b6P59708 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Sf3b6P59708 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.16□□□□□ -0.78
Sf3b6P59708 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.16□□□□□ -0.78
Sf3b6P59708 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sf3b6P59708 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.16□□□□□ -0.78
Sf3b6P59708 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Sf3b6P59708 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.16□□□□□ -0.78
Sf3b6P59708 Gm45161-201ENSMUST00000207316 2263 ntBASIC10.16□□□□□ -0.78
Sf3b6P59708 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Sf3b6P59708 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.15□□□□□ -0.78
Sf3b6P59708 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.15□□□□□ -0.78
Sf3b6P59708 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.15□□□□□ -0.78
Sf3b6P59708 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Gm24255-201ENSMUST00000104481 128 ntBASIC10.15□□□□□ -0.78
Sf3b6P59708 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Sf3b6P59708 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Sf3b6P59708 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.15□□□□□ -0.78
Sf3b6P59708 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.15□□□□□ -0.78
Sf3b6P59708 Gm25668-201ENSMUST00000157700 129 ntBASIC10.15□□□□□ -0.78
Sf3b6P59708 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.15□□□□□ -0.78
Sf3b6P59708 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Gm16107-201ENSMUST00000162523 862 ntBASIC10.15□□□□□ -0.78
Sf3b6P59708 Gm25025-201ENSMUST00000175018 111 ntBASIC10.15□□□□□ -0.78
Sf3b6P59708 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Gm7895-201ENSMUST00000187459 1173 ntBASIC10.15□□□□□ -0.78
Sf3b6P59708 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.15□□□□□ -0.78
Sf3b6P59708 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Gm6450-201ENSMUST00000200896 574 ntBASIC10.15□□□□□ -0.78
Sf3b6P59708 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.15□□□□□ -0.78
Sf3b6P59708 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Gm5178-201ENSMUST00000219380 898 ntBASIC10.15□□□□□ -0.78
Sf3b6P59708 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10.15□□□□□ -0.78
Sf3b6P59708 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.15□□□□□ -0.78
Sf3b6P59708 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Sf3b6P59708 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC10.15□□□□□ -0.78
Sf3b6P59708 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Sf3b6P59708 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sf3b6P59708 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms