Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 n-R5s106-201ENSMUST00000179060 119 ntBASIC11.71□□□□□ -0.53
Sox1P53783 n-R5s118-201ENSMUST00000179887 119 ntBASIC11.71□□□□□ -0.53
Sox1P53783 Gm44917-201ENSMUST00000208798 520 ntBASIC11.71□□□□□ -0.53
Sox1P53783 Gm18124-201ENSMUST00000210695 706 ntBASIC11.71□□□□□ -0.53
Sox1P53783 AC164614.1-201ENSMUST00000216038 397 ntBASIC11.71□□□□□ -0.53
Sox1P53783 Gm5178-201ENSMUST00000219380 898 ntBASIC11.71□□□□□ -0.53
Sox1P53783 AC134601.2-201ENSMUST00000221071 130 ntBASIC11.71□□□□□ -0.53
Sox1P53783 Gm5194-201ENSMUST00000221457 742 ntBASIC11.71□□□□□ -0.53
Sox1P53783 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Sox1P53783 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox1P53783 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox1P53783 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox1P53783 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox1P53783 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox1P53783 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.71□□□□□ -0.54
Sox1P53783 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sox1P53783 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Sox1P53783 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox1P53783 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox1P53783 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox1P53783 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sox1P53783 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox1P53783 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sox1P53783 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox1P53783 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Sox1P53783 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox1P53783 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox1P53783 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11.71□□□□□ -0.54
Sox1P53783 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC11.71□□□□□ -0.54
Sox1P53783 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox1P53783 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
Sox1P53783 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.7□□□□□ -0.54
Sox1P53783 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.7□□□□□ -0.54
Sox1P53783 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.7□□□□□ -0.54
Sox1P53783 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Sox1P53783 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Sox1P53783 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Sox1P53783 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Gm15528-201ENSMUST00000117821 864 ntBASIC11.7□□□□□ -0.54
Sox1P53783 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC11.7□□□□□ -0.54
Sox1P53783 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Gm5529-201ENSMUST00000165691 891 ntBASIC11.7□□□□□ -0.54
Sox1P53783 Gm7928-201ENSMUST00000181249 701 ntBASIC11.7□□□□□ -0.54
Sox1P53783 Gm37284-201ENSMUST00000193607 539 ntBASIC11.7□□□□□ -0.54
Sox1P53783 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Gm36980-201ENSMUST00000195643 622 ntBASIC11.7□□□□□ -0.54
Sox1P53783 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC11.7□□□□□ -0.54
Sox1P53783 Id2-203ENSMUST00000222667 958 ntBASIC11.7□□□□□ -0.54
Sox1P53783 CT009550.1-201ENSMUST00000225750 864 ntBASIC11.7□□□□□ -0.54
Sox1P53783 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC11.7□□□□□ -0.54
Sox1P53783 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC11.7□□□□□ -0.54
Sox1P53783 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.7□□□□□ -0.54
Sox1P53783 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Sox1P53783 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Sox1P53783 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.7□□□□□ -0.54
Sox1P53783 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox1P53783 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC11.69□□□□□ -0.54
Sox1P53783 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Sox1P53783 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Sox1P53783 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.69□□□□□ -0.54
Sox1P53783 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox1P53783 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Sox1P53783 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms