Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ptx3P48759 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Ptx3P48759 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ptx3P48759 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ptx3P48759 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ptx3P48759 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Ptx3P48759 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Ptx3P48759 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.7□□□□□ -0.7
Ptx3P48759 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ptx3P48759 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.7□□□□□ -0.7
Ptx3P48759 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.7□□□□□ -0.7
Ptx3P48759 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Ptx3P48759 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Ptx3P48759 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ptx3P48759 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ptx3P48759 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.69□□□□□ -0.7
Ptx3P48759 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.69□□□□□ -0.7
Ptx3P48759 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.69□□□□□ -0.7
Ptx3P48759 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.69□□□□□ -0.7
Ptx3P48759 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC10.69□□□□□ -0.7
Ptx3P48759 Gm12247-201ENSMUST00000117585 670 ntBASIC10.69□□□□□ -0.7
Ptx3P48759 Gm11892-201ENSMUST00000117711 1202 ntBASIC10.69□□□□□ -0.7
Ptx3P48759 Gm1848-201ENSMUST00000120711 789 ntBASIC10.69□□□□□ -0.7
Ptx3P48759 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.69□□□□□ -0.7
Ptx3P48759 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.69□□□□□ -0.7
Ptx3P48759 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC10.69□□□□□ -0.7
Ptx3P48759 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.69□□□□□ -0.7
Ptx3P48759 Gm27438-201ENSMUST00000183480 110 ntBASIC10.69□□□□□ -0.7
Ptx3P48759 Gm2875-201ENSMUST00000211333 360 ntBASIC10.69□□□□□ -0.7
Ptx3P48759 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.69□□□□□ -0.7
Ptx3P48759 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.69□□□□□ -0.7
Ptx3P48759 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.69□□□□□ -0.7
Ptx3P48759 AC165260.2-203ENSMUST00000224237 336 ntBASIC10.69□□□□□ -0.7
Ptx3P48759 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Ptx3P48759 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.69□□□□□ -0.7
Ptx3P48759 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.69□□□□□ -0.7
Ptx3P48759 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ptx3P48759 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ptx3P48759 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ptx3P48759 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ptx3P48759 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ptx3P48759 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ptx3P48759 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ptx3P48759 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ptx3P48759 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ptx3P48759 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ptx3P48759 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ptx3P48759 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.68□□□□□ -0.7
Ptx3P48759 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ptx3P48759 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ptx3P48759 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.68□□□□□ -0.7
Ptx3P48759 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ptx3P48759 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
Ptx3P48759 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.68□□□□□ -0.7
Ptx3P48759 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Ptx3P48759 Gm23272-201ENSMUST00000104053 129 ntBASIC10.68□□□□□ -0.7
Ptx3P48759 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ptx3P48759 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC10.68□□□□□ -0.7
Ptx3P48759 Gm12419-201ENSMUST00000116649 636 ntBASIC10.68□□□□□ -0.7
Ptx3P48759 Gm11500-201ENSMUST00000118237 601 ntBASIC10.68□□□□□ -0.7
Ptx3P48759 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ptx3P48759 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ptx3P48759 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC10.68□□□□□ -0.7
Ptx3P48759 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.68□□□□□ -0.7
Ptx3P48759 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms