Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
TfamP40630 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.06□□□□□ -0.64
TfamP40630 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TfamP40630 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TfamP40630 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
TfamP40630 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TfamP40630 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.05□□□□□ -0.64
TfamP40630 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.05□□□□□ -0.64
TfamP40630 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TfamP40630 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
TfamP40630 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
TfamP40630 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TfamP40630 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TfamP40630 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
TfamP40630 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TfamP40630 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
TfamP40630 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TfamP40630 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.05□□□□□ -0.64
TfamP40630 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TfamP40630 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
TfamP40630 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.05□□□□□ -0.64
TfamP40630 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.05□□□□□ -0.64
TfamP40630 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.05□□□□□ -0.64
TfamP40630 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
TfamP40630 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
TfamP40630 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.05□□□□□ -0.64
TfamP40630 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TfamP40630 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.05□□□□□ -0.64
TfamP40630 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.05□□□□□ -0.64
TfamP40630 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
TfamP40630 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
TfamP40630 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TfamP40630 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TfamP40630 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
TfamP40630 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
TfamP40630 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
TfamP40630 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TfamP40630 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TfamP40630 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
TfamP40630 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.05□□□□□ -0.64
TfamP40630 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TfamP40630 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
TfamP40630 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TfamP40630 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
TfamP40630 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.05□□□□□ -0.64
TfamP40630 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.05□□□□□ -0.64
TfamP40630 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.04□□□□□ -0.64
TfamP40630 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
TfamP40630 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
TfamP40630 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
TfamP40630 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
TfamP40630 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
TfamP40630 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.04□□□□□ -0.64
TfamP40630 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.04□□□□□ -0.64
TfamP40630 Gm8566-201ENSMUST00000120174 465 ntBASIC11.04□□□□□ -0.64
TfamP40630 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.04□□□□□ -0.64
TfamP40630 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
TfamP40630 Gm8815-201ENSMUST00000173809 620 ntBASIC11.04□□□□□ -0.64
TfamP40630 Gm27530-201ENSMUST00000184096 98 ntBASIC11.04□□□□□ -0.64
TfamP40630 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.04□□□□□ -0.64
TfamP40630 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.04□□□□□ -0.64
TfamP40630 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.04□□□□□ -0.64
TfamP40630 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.04□□□□□ -0.64
TfamP40630 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.04□□□□□ -0.64
TfamP40630 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
TfamP40630 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.04□□□□□ -0.64
TfamP40630 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TfamP40630 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms