Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.02□□□□□ -0.81
P04224 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P04224 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P04224 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P04224 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
P04224 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P04224 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P04224 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
P04224 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
P04224 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P04224 Gm13875-201ENSMUST00000120162 282 ntBASIC10.02□□□□□ -0.81
P04224 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.02□□□□□ -0.81
P04224 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.02□□□□□ -0.81
P04224 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
P04224 Gm18711-201ENSMUST00000199341 750 ntBASIC10.02□□□□□ -0.81
P04224 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
P04224 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
P04224 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
P04224 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
P04224 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
P04224 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.02□□□□□ -0.81
P04224 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.02□□□□□ -0.81
P04224 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
P04224 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P04224 AC154176.2-201ENSMUST00000225376 6429 ntBASIC10.02□□□□□ -0.81
P04224 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P04224 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P04224 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.02□□□□□ -0.81
P04224 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P04224 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.81
P04224 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P04224 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
P04224 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
P04224 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
P04224 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P04224 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P04224 Lama3-201ENSMUST00000092070 10548 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
P04224 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.02□□□□□ -0.81
P04224 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
P04224 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
P04224 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
P04224 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P04224 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P04224 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
P04224 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.02□□□□□ -0.81
P04224 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.01□□□□□ -0.81
P04224 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC10.01□□□□□ -0.81
P04224 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.01□□□□□ -0.81
P04224 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.01□□□□□ -0.81
P04224 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10.01□□□□□ -0.81
P04224 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
P04224 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Gm43014-201ENSMUST00000198568 2443 ntBASIC10.01□□□□□ -0.81
P04224 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Gm6023-201ENSMUST00000118217 606 ntBASIC10.01□□□□□ -0.81
P04224 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.01□□□□□ -0.81
P04224 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
P04224 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
P04224 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.01□□□□□ -0.81
P04224 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.01□□□□□ -0.81
P04224 Gm27731-201ENSMUST00000185192 107 ntBASIC10.01□□□□□ -0.81
P04224 Gm28882-201ENSMUST00000185504 314 ntBASIC10.01□□□□□ -0.81
P04224 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.01□□□□□ -0.81
P04224 Gm17931-201ENSMUST00000208132 634 ntBASIC10.01□□□□□ -0.81
P04224 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.01□□□□□ -0.81
P04224 Snora73a-201ENSMUST00000082453 205 ntBASIC10.01□□□□□ -0.81
P04224 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.01□□□□□ -0.81
P04224 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
P04224 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
P04224 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC10□□□□□ -0.81
P04224 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC10□□□□□ -0.81
P04224 Gm8155-201ENSMUST00000216363 1612 ntBASIC10□□□□□ -0.81
P04224 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms