Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TcraP01849 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC8.32□□□□□ -1.08
TcraP01849 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TcraP01849 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
TcraP01849 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TcraP01849 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TcraP01849 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
TcraP01849 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
TcraP01849 AC165351.1-201ENSMUST00000219078 2020 ntBASIC8.32□□□□□ -1.08
TcraP01849 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
TcraP01849 AC140462.2-201ENSMUST00000225718 2433 ntBASIC8.32□□□□□ -1.08
TcraP01849 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
TcraP01849 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
TcraP01849 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC8.32□□□□□ -1.08
TcraP01849 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC8.32□□□□□ -1.08
TcraP01849 Gm37131-201ENSMUST00000192502 1561 ntBASIC8.32□□□□□ -1.08
TcraP01849 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TcraP01849 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
TcraP01849 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
TcraP01849 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC8.32□□□□□ -1.08
TcraP01849 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
TcraP01849 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC8.32□□□□□ -1.08
TcraP01849 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TcraP01849 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC8.32□□□□□ -1.08
TcraP01849 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
TcraP01849 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
TcraP01849 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC8.32□□□□□ -1.08
TcraP01849 Gm14441-201ENSMUST00000121960 540 ntBASIC8.32□□□□□ -1.08
TcraP01849 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC8.32□□□□□ -1.08
TcraP01849 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC8.32□□□□□ -1.08
TcraP01849 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
TcraP01849 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC8.32□□□□□ -1.08
TcraP01849 Gm17150-201ENSMUST00000165577 381 ntBASIC8.32□□□□□ -1.08
TcraP01849 Gm5706-201ENSMUST00000181525 993 ntBASIC8.32□□□□□ -1.08
TcraP01849 Gm27023-201ENSMUST00000182372 285 ntBASIC8.32□□□□□ -1.08
TcraP01849 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
TcraP01849 Gm17931-201ENSMUST00000208132 634 ntBASIC8.32□□□□□ -1.08
TcraP01849 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TcraP01849 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TcraP01849 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TcraP01849 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TcraP01849 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
TcraP01849 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TcraP01849 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC8.32□□□□□ -1.08
TcraP01849 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
TcraP01849 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
TcraP01849 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
TcraP01849 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
TcraP01849 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
TcraP01849 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
TcraP01849 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TcraP01849 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
TcraP01849 Gm21039-201ENSMUST00000223359 2012 ntBASIC8.32□□□□□ -1.08
TcraP01849 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TcraP01849 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TcraP01849 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TcraP01849 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC8.32□□□□□ -1.08
TcraP01849 AC153380.1-201ENSMUST00000214959 2364 ntBASIC8.32□□□□□ -1.08
TcraP01849 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TcraP01849 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC8.31□□□□□ -1.08
TcraP01849 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC8.31□□□□□ -1.08
TcraP01849 Gm8793-201ENSMUST00000183069 1303 ntBASIC8.31□□□□□ -1.08
TcraP01849 AC114008.2-201ENSMUST00000227699 1347 ntBASIC8.31□□□□□ -1.08
TcraP01849 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
TcraP01849 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
TcraP01849 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
TcraP01849 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
TcraP01849 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC8.31□□□□□ -1.08
TcraP01849 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC8.31□□□□□ -1.08
TcraP01849 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
TcraP01849 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC8.31□□□□□ -1.08
TcraP01849 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC8.31□□□□□ -1.08
TcraP01849 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Gm8738-201ENSMUST00000172606 329 ntBASIC8.31□□□□□ -1.08
TcraP01849 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC8.31□□□□□ -1.08
TcraP01849 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC8.31□□□□□ -1.08
TcraP01849 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC8.31□□□□□ -1.08
TcraP01849 Tyms-ps-201ENSMUST00000219550 915 ntBASIC8.31□□□□□ -1.08
TcraP01849 Gm45930-201ENSMUST00000221330 292 ntBASIC8.31□□□□□ -1.08
TcraP01849 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC8.31□□□□□ -1.08
TcraP01849 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
TcraP01849 n-R5s195-201ENSMUST00000082891 119 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms