Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.96□□□□□ -0.65
Hcn1O88704 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Hcn1O88704 Gm14724-201ENSMUST00000118400 537 ntBASIC10.96□□□□□ -0.65
Hcn1O88704 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.96□□□□□ -0.65
Hcn1O88704 Gm8566-201ENSMUST00000120174 465 ntBASIC10.96□□□□□ -0.65
Hcn1O88704 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.96□□□□□ -0.65
Hcn1O88704 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.96□□□□□ -0.65
Hcn1O88704 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.96□□□□□ -0.65
Hcn1O88704 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.96□□□□□ -0.65
Hcn1O88704 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC10.96□□□□□ -0.65
Hcn1O88704 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Hcn1O88704 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hcn1O88704 Mir6979-201ENSMUST00000183927 56 ntBASIC10.96□□□□□ -0.65
Hcn1O88704 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.96□□□□□ -0.65
Hcn1O88704 Gm43138-201ENSMUST00000199123 708 ntBASIC10.96□□□□□ -0.65
Hcn1O88704 Gm4482-201ENSMUST00000200876 742 ntBASIC10.96□□□□□ -0.65
Hcn1O88704 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Hcn1O88704 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.96□□□□□ -0.65
Hcn1O88704 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC10.96□□□□□ -0.65
Hcn1O88704 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC10.96□□□□□ -0.65
Hcn1O88704 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.96□□□□□ -0.65
Hcn1O88704 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.96□□□□□ -0.65
Hcn1O88704 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hcn1O88704 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hcn1O88704 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Hcn1O88704 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
Hcn1O88704 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hcn1O88704 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Hcn1O88704 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hcn1O88704 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Hcn1O88704 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hcn1O88704 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hcn1O88704 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Hcn1O88704 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hcn1O88704 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Hcn1O88704 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Hcn1O88704 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.96□□□□□ -0.66
Hcn1O88704 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Hcn1O88704 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.96□□□□□ -0.66
Hcn1O88704 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Hcn1O88704 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.95□□□□□ -0.66
Hcn1O88704 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Hcn1O88704 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Hcn1O88704 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Hcn1O88704 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Hcn1O88704 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.95□□□□□ -0.66
Hcn1O88704 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.95□□□□□ -0.66
Hcn1O88704 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.95□□□□□ -0.66
Hcn1O88704 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Mir3102-201ENSMUST00000175555 104 ntBASIC10.95□□□□□ -0.66
Hcn1O88704 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.95□□□□□ -0.66
Hcn1O88704 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.95□□□□□ -0.66
Hcn1O88704 Gm8100-201ENSMUST00000182906 988 ntBASIC10.95□□□□□ -0.66
Hcn1O88704 Gm2965-201ENSMUST00000198365 343 ntBASIC10.95□□□□□ -0.66
Hcn1O88704 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.95□□□□□ -0.66
Hcn1O88704 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Hcn1O88704 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.95□□□□□ -0.66
Hcn1O88704 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Hcn1O88704 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.95□□□□□ -0.66
Hcn1O88704 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.95□□□□□ -0.66
Hcn1O88704 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Hcn1O88704 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Hcn1O88704 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Hcn1O88704 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.95□□□□□ -0.66
Hcn1O88704 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.94□□□□□ -0.66
Hcn1O88704 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms