Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubr1O70481 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ubr1O70481 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ubr1O70481 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ubr1O70481 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.55□□□□□ -0.08
Ubr1O70481 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC14.55□□□□□ -0.08
Ubr1O70481 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
Ubr1O70481 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC14.55□□□□□ -0.08
Ubr1O70481 Gm16288-201ENSMUST00000137940 367 ntBASIC14.55□□□□□ -0.08
Ubr1O70481 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC14.55□□□□□ -0.08
Ubr1O70481 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC14.55□□□□□ -0.08
Ubr1O70481 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC14.55□□□□□ -0.08
Ubr1O70481 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC14.55□□□□□ -0.08
Ubr1O70481 AC152169.1-201ENSMUST00000223901 701 ntBASIC14.55□□□□□ -0.08
Ubr1O70481 Nsmce2-203ENSMUST00000227173 1122 ntBASIC14.55□□□□□ -0.08
Ubr1O70481 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ubr1O70481 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ubr1O70481 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ubr1O70481 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ubr1O70481 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ubr1O70481 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ubr1O70481 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ubr1O70481 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ubr1O70481 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ubr1O70481 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Ubr1O70481 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ubr1O70481 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ubr1O70481 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC14.55□□□□□ -0.08
Ubr1O70481 Gm3318-201ENSMUST00000217604 1183 ntBASIC14.55□□□□□ -0.08
Ubr1O70481 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ubr1O70481 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ubr1O70481 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ubr1O70481 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC14.54□□□□□ -0.08
Ubr1O70481 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ubr1O70481 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ubr1O70481 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ubr1O70481 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ubr1O70481 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ubr1O70481 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ubr1O70481 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ubr1O70481 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
Ubr1O70481 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Ubr1O70481 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ubr1O70481 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ubr1O70481 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ubr1O70481 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ubr1O70481 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ubr1O70481 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.54□□□□□ -0.08
Ubr1O70481 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ubr1O70481 Gm12947-201ENSMUST00000116114 420 ntBASIC14.54□□□□□ -0.08
Ubr1O70481 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ubr1O70481 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ubr1O70481 Gm27316-201ENSMUST00000184884 277 ntBASIC14.54□□□□□ -0.08
Ubr1O70481 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC14.54□□□□□ -0.08
Ubr1O70481 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC14.54□□□□□ -0.08
Ubr1O70481 CT025689.1-201ENSMUST00000225214 283 ntBASIC14.54□□□□□ -0.08
Ubr1O70481 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ubr1O70481 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ubr1O70481 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ubr1O70481 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ubr1O70481 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ubr1O70481 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ubr1O70481 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC14.53□□□□□ -0.08
Ubr1O70481 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ubr1O70481 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ubr1O70481 Gm44913-201ENSMUST00000208060 2990 ntBASIC14.53□□□□□ -0.08
Ubr1O70481 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ubr1O70481 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC14.53□□□□□ -0.08
Ubr1O70481 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ubr1O70481 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ubr1O70481 Gm11942-201ENSMUST00000180255 345 ntBASIC14.53□□□□□ -0.08
Ubr1O70481 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ubr1O70481 Gm8234-201ENSMUST00000198523 1107 ntBASIC14.53□□□□□ -0.08
Ubr1O70481 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC14.53□□□□□ -0.08
Ubr1O70481 Gm3926-201ENSMUST00000223378 1123 ntBASIC14.53□□□□□ -0.08
Ubr1O70481 CT030135.2-201ENSMUST00000225255 893 ntBASIC14.53□□□□□ -0.08
Ubr1O70481 CT009713.2-201ENSMUST00000225532 1149 ntBASIC14.53□□□□□ -0.08
Ubr1O70481 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ubr1O70481 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ubr1O70481 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ubr1O70481 Gm6478-201ENSMUST00000099450 742 ntBASIC14.53□□□□□ -0.08
Ubr1O70481 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ubr1O70481 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ubr1O70481 AC153524.2-202ENSMUST00000220401 1794 ntBASIC14.53□□□□□ -0.08
Ubr1O70481 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ubr1O70481 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ubr1O70481 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ubr1O70481 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ubr1O70481 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC14.53□□□□□ -0.08
Ubr1O70481 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ubr1O70481 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Ubr1O70481 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ubr1O70481 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ubr1O70481 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ubr1O70481 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.52□□□□□ -0.08
Ubr1O70481 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ubr1O70481 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ubr1O70481 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ubr1O70481 Gm9625-201ENSMUST00000180422 955 ntBASIC14.52□□□□□ -0.08
Ubr1O70481 Gm28671-201ENSMUST00000187036 692 ntBASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms