Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.3□□□□□ -0.76
Pcdh1F7BJK1 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Gm14109-201ENSMUST00000118814 309 ntBASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Gm6334-201ENSMUST00000207083 228 ntBASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Gm7940-201ENSMUST00000218195 769 ntBASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 AC125350.2-201ENSMUST00000224737 727 ntBASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh1F7BJK1 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Gm21156-201ENSMUST00000189693 869 ntBASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Gm32999-201ENSMUST00000192693 562 ntBASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Gm7430-201ENSMUST00000193824 1144 ntBASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Cts7-204ENSMUST00000225321 1257 ntBASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.28□□□□□ -0.76
Pcdh1F7BJK1 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Pcdh1F7BJK1 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Pcdh1F7BJK1 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms